RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DTX4Q9Y2E6 619 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 R3HDM2Q9Y2K5 976 aaKnown RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 AAR2Q9Y312 384 aaKnown RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 STRAPQ9Y3F4 350 aaKnown RBP3.39□□□□□ -1.87
PRPF4-203ENST00000488937 SNX9Q9Y5X1 595 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 U3KQV3 271 aa3.39□□□□□ -1.87
PRPF4-203ENST00000488937 CYP2D7A0A087X1C5 515 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 PRAMEF33A0A0G2JMD5 474 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CGB1A6NKQ9 187 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 MCIDASD6RGH6 385 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 PTGESO14684 152 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 PPM1DO15297 605 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 OGG1O15527 345 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 TRIAP1O43715 76 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 KIF5CO60282 957 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 NEMFO60524 1076 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SELENOFO60613 162 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 PRAMEF10O60809 474 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 NME6O75414 186 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ERN1O75460 977 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ZNF821O75541 412 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CREG1O75629 220 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ZFPL1O95159 310 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ADCY5O95622 1261 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CXCL14O95715 111 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 MT-CYBP00156 380 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GH1P01241 217 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 RLN1P04808 185 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CCDC192P0DO97 292 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 KRT5P13647 590 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 AREGP15514 252 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 IL7RP16871 459 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GNAZP19086 355 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ANXA7P20073 488 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 DRD4P21917 467 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GLRA2P23416 452 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ITPKBP27987 946 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GSTM2P28161 218 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 PTPN4P29074 926 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GKP32189 559 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 PCGF2P35227 344 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 DIO1P49895 249 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 HTR6P50406 440 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 METAP1P53582 386 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CDH13P55290 713 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SLC37A1P57057 533 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 PTENP60484 403 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 YWHAZP63104 245 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SIRPAP78324 504 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GPC5P78333 572 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 RAE1P78406 368 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GCNT1Q02742 428 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GAD2Q05329 585 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SPOCK1Q08629 439 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 IL24Q13007 206 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SCGB2A2Q13296 93 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 MXD4Q14582 209 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SLC39A14Q15043 492 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CYP2A13Q16696 494 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 FASTKD1Q53R41 847 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 HERC4Q5GLZ8 1057 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 C6orf141Q5SZD1 244 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 TEX35Q5T0J7 233 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 LRIF1Q5T3J3 769 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 FBXO42Q6P3S6 717 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 NOTUMQ6P988 496 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 TEX38Q6PEX7 206 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 BRAT1Q6PJG6 821 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 FAM198BQ6UWH4 519 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SLC36A4Q6YBV0 504 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 TMEM182Q6ZP80 229 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 INTS8Q75QN2 995 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 MTSS1LQ765P7 747 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 MDGA2Q7Z553 956 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SPATA21Q7Z572 469 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 TAF8Q7Z7C8 310 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CLNKQ7Z7G1 428 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 LDB1Q86U70 411 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 DTX2Q86UW9 622 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 WDR5BQ86VZ2 330 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ARID3BQ8IVW6 561 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SERPINA12Q8IW75 414 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GHDCQ8N2G8 530 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 RASGEF1CQ8N431 466 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 BANPQ8N9N5 519 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ADPRHL1Q8NDY3 354 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SRFBP1Q8NEF9 429 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 DNAAF1Q8NEP3 725 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 OR6C4Q8NGE1 309 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SPSB1Q96BD6 273 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 FAM136AQ96C01 138 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SPATA13Q96N96 652 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 FYTTD1Q96QD9 318 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ZNF577Q9BSK1 485 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 THUMPD2Q9BTF0 503 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 KATNB1Q9BVA0 655 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CADM1Q9BY67 442 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 RNF26Q9BY78 433 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 AMBRA1Q9C0C7 1298 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 POLR1EQ9GZS1 481 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms