RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 GRK6P43250 576 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 PLTPP55058 493 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 ARL4CP56559 192 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 CTBSQ01459 385 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 GUCY2DQ02846 1103 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 SLC14A1Q13336 389 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 GTF2H3Q13889 308 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 CRYMQ14894 314 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 ELOCQ15369 112 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 INAVAQ3KP66 663 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 GPR33Q49SQ1 333 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 ANKRD20A4Q4UJ75 823 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 PYCR3Q53H96 274 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 KIAA0930Q6ICG6 404 aaPredicted RBP10.91□□□□□ -0.66
UBE4B-210ENST00000488228 SLC30A9Q6PML9 568 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 ZDHHC24Q6UX98 284 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 PIP4P1Q86T03 277 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 LDB1Q86U70 411 aaPredicted RBP10.91□□□□□ -0.66
UBE4B-210ENST00000488228 ANKMY2Q8IV38 441 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 ZNF547Q8IVP9 402 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 SFTPA2Q8IWL1 248 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 UNC5BQ8IZJ1 945 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 PDIK1LQ8N165 341 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 FSTL5Q8N475 847 aaPredicted RBP10.91□□□□□ -0.66
UBE4B-210ENST00000488228 BEND7Q8N7W2 519 aaPredicted RBP10.91□□□□□ -0.66
UBE4B-210ENST00000488228 KYQ8NBH2 561 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 BBOF1Q8ND07 529 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 OR4L1Q8NH43 312 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 COPS8Q99627 209 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 CATSPERZQ9NTU4 200 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 SIRPGQ9P1W8 387 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 FAM8A1Q9UBU6 413 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 ZNHIT2Q9UHR6 403 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 DMGDHQ9UI17 866 aaKnown RBP10.91□□□□□ -0.66
UBE4B-210ENST00000488228 PCOLCE2Q9UKZ9 415 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 KCNK6Q9Y257 313 aa10.91□□□□□ -0.66
UBE4B-210ENST00000488228 COL27A1Q8IZC6 1860 aaPredicted RBP10.91□□□□□ -0.66
UBE4B-210ENST00000488228 IGLV3-16A0A075B6K0 115 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 ZCWPW2A0A1B0GU75 182 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 B4DGG1 531 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 LMO7DNF2Z398 122 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 SMAPO00193 183 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 NDC80O14777 642 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 CHUKO15111 745 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 SIGLEC6O43699 453 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 VEGFDO43915 354 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 CDK14O94921 469 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 ANXA6P08133 673 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 ELK3P41970 407 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 ACTR1BP42025 376 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 ACTR1AP61163 376 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 TMEM115Q12893 351 aaPredicted RBP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 ILF3Q12906 894 aaKnown RBP eCLIP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 PDIA2Q13087 525 aaKnown RBP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 SUZ12Q15022 739 aaKnown RBP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 INSCQ1MX18 579 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 FASTKD1Q53R41 847 aaKnown RBP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 CHST15Q7LFX5 561 aaPredicted RBP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 TAF8Q7Z7C8 310 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 LRRTM4Q86VH4 590 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 NRROSQ86YC3 692 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 CLDN19Q8N6F1 224 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 OR4C6Q8NH72 309 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 BAHD1Q8TBE0 780 aaPredicted RBP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 FBXO25Q8TCJ0 367 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 RHBDD1Q8TEB9 315 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 ART4Q93070 314 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 DCUN1D1Q96GG9 259 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 TTC25Q96NG3 672 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 EBNA1BP2Q99848 306 aaKnown RBP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 RMI1Q9H9A7 625 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 PLAC1Q9HBJ0 212 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 TRNAU1APQ9NX07 287 aaKnown RBP10.9□□□□□ -0.66
UBE4B-210ENST00000488228 ZDHHC3Q9NYG2 299 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 NLGN3Q9NZ94 848 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 FTSJ1Q9UET6 329 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 DOLKQ9UPQ8 538 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 DNAJC16Q9Y2G8 782 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 PTPRBP23467 1997 aa10.9□□□□□ -0.66
UBE4B-210ENST00000488228 DCDC2BA2VCK2 349 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 GPR89AB7ZAQ6 455 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
UBE4B-210ENST00000488228 CFAP99D6REC4 459 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 E7ESA3 106 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 TM4SF5O14894 197 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 GIPC1O14908 333 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 YY2O15391 372 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 CD3EAPO15446 510 aaKnown RBP10.89□□□□□ -0.67
UBE4B-210ENST00000488228 SGTAO43765 313 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 OR1I1O60431 355 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 CBFA2T3O75081 653 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 USP1O94782 785 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 RHOXF2BP0C7M4 288 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 GPR89BP0CG08 455 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 PAMP19021 973 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 ARCN1P48444 511 aaKnown RBP10.89□□□□□ -0.67
UBE4B-210ENST00000488228 NOVA1P51513 510 aaKnown RBP10.89□□□□□ -0.67
UBE4B-210ENST00000488228 LRP8Q14114 963 aa10.89□□□□□ -0.67
UBE4B-210ENST00000488228 TEX35Q5T0J7 233 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms