RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 LRRC39Q96DD0 335 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 PWWP2AQ96N64 755 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 EBNA1BP2Q99848 306 aaKnown RBP15.55■□□□□ 0.08
C9orf3-219ENST00000488186 LRRC61Q9BV99 259 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 DUSP23Q9BVJ7 150 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 TREX1Q9NSU2 369 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 TRNAU1APQ9NX07 287 aaKnown RBP15.55■□□□□ 0.08
C9orf3-219ENST00000488186 ZDHHC3Q9NYG2 299 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 TMPRSS11EQ9UL52 423 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 PRKAB1Q9Y478 270 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 BPTFQ12830 3046 aa15.55■□□□□ 0.08
C9orf3-219ENST00000488186 F8W8V4 182 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 DNAJC6O75061 913 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 USP1O94782 785 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 FUCA1P04066 466 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 CEACAM1P13688 526 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 VCLP18206 1134 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 LRP8Q14114 963 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 LONRF1Q17RB8 773 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 INSCQ1MX18 579 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 DEFB133Q30KQ1 61 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 KCTD16Q68DU8 428 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 PSAPL1Q6NUJ1 521 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 TMEM220Q6QAJ8 160 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 DET1Q7L5Y6 550 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 CCDC25Q86WR0 208 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 GLMNQ92990 594 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 ART4Q93070 314 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 CFAP36Q96G28 342 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 SCARF2Q96GP6 870 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-219ENST00000488186 ZNF514Q96K75 400 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-219ENST00000488186 NLGN3Q9NZ94 848 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 GRHL1Q9NZI5 618 aa15.54■□□□□ 0.08
C9orf3-219ENST00000488186 ZC3H7BQ9UGR2 993 aaKnown RBP15.54■□□□□ 0.08
C9orf3-219ENST00000488186 TDRD6O60522 2096 aaKnown RBP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 ESYT3A0FGR9 886 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 OR2AG2A6NM03 316 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 AGAP14A8MT82 685 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 LMO7DNF2Z398 122 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 YY2O15391 372 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 NDUFS3O75489 264 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 BANF1O75531 89 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 LDOC1O95751 146 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 PRSS56P0CW18 603 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 ACP5P13686 325 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 ATP1B2P14415 290 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 FOXN2P32314 431 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 ELK3P41970 407 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 TTPAP49638 278 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 CTBSQ01459 385 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 HLTFQ14527 1009 aaKnown RBP eCLIP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 PLA2G4EQ3MJ16 856 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 MSS51Q4VC12 460 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 KHDC1Q4VXA5 237 aaKnown RBP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 SPANXN3Q5MJ09 141 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 KIAA0930Q6ICG6 404 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 SLC30A9Q6PML9 568 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 LVRNQ6Q4G3 990 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 TMEM135Q86UB9 458 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 ANKMY2Q8IV38 441 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 PALM2Q8IXS6 379 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 PIANPQ8IYJ0 282 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 RASGEF1AQ8N9B8 481 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 FAM46DQ8NEK8 389 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 SGF29Q96ES7 293 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 SGSM3Q96HU1 749 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 CDC6Q99741 560 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 CLPBQ9H078 707 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 CAAP1Q9H8G2 361 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 L2HGDHQ9H9P8 463 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 SAYSD1Q9NPB0 183 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 PPANQ9NQ55 473 aaKnown RBP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 C20orf96Q9NUD7 363 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 EVA1BQ9NVM1 165 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 MTRF1LQ9UGC7 380 aaKnown RBP15.53■□□□□ 0.08
C9orf3-219ENST00000488186 GPR34Q9UPC5 381 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 CHMP2BQ9UQN3 213 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 SCN8AQ9UQD0 1980 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 SPTBN2O15020 2390 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 MYLKQ15746 1914 aa15.53■□□□□ 0.08
C9orf3-219ENST00000488186 TRBV5-4A0A0C4DH59 114 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 GOLGA8KD6RF30 607 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 GOLGA8TH3BQL2 631 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 TPP1O14773 563 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 EIF3HO15372 352 aaKnown RBP eCLIP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 CELA2BP08218 269 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 RHOXF2BP0C7M4 288 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 ZNF7P17097 686 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 KCNA4P22459 653 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 CA5AP35218 305 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 ACTR1BP42025 376 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 NSG1P42857 185 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 ACTR1AP61163 376 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 ITIH4Q14624 930 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 SMAD1Q15797 465 aaKnown RBP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 DBN1Q16643 649 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 NEPROQ6NW34 567 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 ZBED8Q8IZ13 594 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 FBXO36Q8NEA4 188 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms