RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ANKRD66B4E2M5 251 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 CLGNO14967 610 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 TIMM44O43615 452 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 TPOP07202 933 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 ACADLP28330 430 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 RAD52P43351 418 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 COMPP49747 757 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 LIG4P49917 911 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 CTSCP53634 463 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 PNLIPRP2P54317 469 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 UBXN2AP68543 259 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 PLIN5Q00G26 463 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 ASPRV1Q53RT3 343 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 KRT79Q5XKE5 535 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 HIST2H2BCQ6DN03 193 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 HIST2H2BDQ6DRA6 164 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 DHRS7BQ6IAN0 325 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 BRAT1Q6PJG6 821 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 TPRG1Q6ZUI0 275 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 ADGRA1Q86SQ6 560 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 PM20D2Q8IYS1 436 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 PGBD5Q8N414 524 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 SYT2Q8N9I0 419 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 AVL9Q8NBF6 648 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 HJURPQ8NCD3 748 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 RND1Q92730 232 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 BICD1Q96G01 975 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 GRAMD2BQ96HH9 432 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 IGSF21Q96ID5 467 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 SMC6Q96SB8 1091 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 SLF1Q9BQI6 1058 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 NEURL2Q9BR09 285 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 APOL6Q9BWW8 343 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 SEBOXQ9HB31 216 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 MARCH4Q9P2E8 410 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 AMACRQ9UHK6 382 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 TINAGQ9UJW2 476 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 PTPRCP08575 1304 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 MAGEA13PA6NCF6 341 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 ANKRD28O15084 1053 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 KDM4BO94953 1096 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 CLDN14O95500 239 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 ABCB1P08183 1280 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 MMP9P14780 707 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 KRT20P35900 424 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 MLLT10P55197 1068 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 DSCR9P59020 149 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 SNRPEP62304 92 aaKnown RBP3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 TMF1P82094 1093 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 IRF3Q14653 427 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 MVPQ14764 893 aaKnown RBP3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 TMEM266Q2M3C6 531 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 KIF19Q2TAC6 998 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 KRT74Q7RTS7 529 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 MAP7D3Q8IWC1 876 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 BEST3Q8N1M1 668 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 TTC30BQ8N4P2 665 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 GCSAMQ8N6F7 178 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 PIGTQ969N2 578 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 EGLN2Q96KS0 407 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 CSF3RQ99062 836 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 DDOQ99489 341 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 SRSF8Q9BRL6 282 aaKnown RBP3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 UBTD1Q9HAC8 227 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 MTMR10Q9NXD2 777 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 NKIRAS2Q9NYR9 191 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 C1RLQ9NZP8 487 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 DNAJB4Q9UDY4 337 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 PADI1Q9ULC6 663 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 ZNF148Q9UQR1 794 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 PTRH2Q9Y3E5 179 aaKnown RBP3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 PCDHGB1Q9Y5G3 927 aa3.68□□□□□ -1.82
HMGB1P36-201ENST00000487709 A0A0G2JPF8 293 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 LNP1A1A4G5 178 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 HNRNPCL3B7ZW38 293 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 NDUFS4O43181 175 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 PRAMEF11O60813 436 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 CSPG5O95196 566 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 PMS2P2O95744 297 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 HNRNPCL4P0DMR1 293 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 ZNF23P17027 643 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 UGT1A1P22309 533 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 KCNA5P22460 613 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 ITGB8P26012 769 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 ACSL1P33121 698 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SIRPAP78324 504 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 POU3F1Q03052 451 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 DLG1Q12959 904 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 GAGE2BQ13066 116 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 ZNF234Q14588 700 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SF3B4Q15427 424 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 GAGE2EQ4V326 116 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 BMP2KLQ5H9B9 411 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 PAPPA-AS1Q5QFB9 102 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 C18orf63Q68DL7 685 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 NAA16Q6N069 864 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 GAGE2AQ6NT46 116 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 SLC30A6Q6NXT4 461 aa3.67□□□□□ -1.82
HMGB1P36-201ENST00000487709 UNQ6126/PRO20091Q6UXV3 157 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms