RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 DNAAF2Q9NVR5 837 aaKnown RBP12.61□□□□□ -0.39
PRDM2-208ENST00000487453 SPASTQ9UBP0 616 aa12.61□□□□□ -0.39
PRDM2-208ENST00000487453 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRDM2-208ENST00000487453 NFU1Q9UMS0 254 aa12.61□□□□□ -0.39
PRDM2-208ENST00000487453 DOLKQ9UPQ8 538 aa12.61□□□□□ -0.39
PRDM2-208ENST00000487453 DGKBQ9Y6T7 804 aa12.61□□□□□ -0.39
PRDM2-208ENST00000487453 FAM169AQ9Y6X4 670 aa12.61□□□□□ -0.39
PRDM2-208ENST00000487453 V9GYY5 206 aaPredicted RBP12.61□□□□□ -0.39
PRDM2-208ENST00000487453 DMDP11532 3685 aa12.61□□□□□ -0.39
PRDM2-208ENST00000487453 UBA6A0AVT1 1052 aaPredicted RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 C4orf47A7E2U8 309 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 GPR89AB7ZAQ6 455 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 FFAR2O15552 330 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 AQP9O43315 295 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 GRID2O43424 1007 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 NUAK1O60285 661 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 DNAJC6O75061 913 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 FUCA1P04066 466 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 GPR89BP0CG08 455 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 ACP5P13686 325 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 DGKAP23743 735 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 PBLDP30039 288 aaPredicted RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 PPARGP37231 505 aaPredicted RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 RXRGP48443 463 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 ARCN1P48444 511 aaKnown RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 TTPAP49638 278 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 BNIP3Q12983 259 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 ELOCQ15369 112 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 INSCQ1MX18 579 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 INAVAQ3KP66 663 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 STPG1Q5TH74 334 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 CERS6Q6ZMG9 384 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 CEP128Q6ZU80 1094 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 SDCCAG8Q86SQ7 713 aaPredicted RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 ALYREFQ86V81 257 aaKnown RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 LRRTM4Q86VH4 590 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 PALM2Q8IXS6 379 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 UNC5BQ8IZJ1 945 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 RASGEF1AQ8N9B8 481 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 GABPB2Q8TAK5 448 aaPredicted RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 HEXDCQ8WVB3 486 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 CCDC97Q96F63 343 aaPredicted RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 SGSM3Q96HU1 749 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 C9orf72Q96LT7 481 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 FAM167BQ9BTA0 163 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 TMEM168Q9H0V1 697 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 UCKL1Q9NWZ5 548 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 FAM8A1Q9UBU6 413 aa12.6□□□□□ -0.39
PRDM2-208ENST00000487453 PCYT1BQ9Y5K3 369 aaPredicted RBP12.6□□□□□ -0.39
PRDM2-208ENST00000487453 PFDN6O15212 129 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 KMOO15229 486 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 NDUFS3O75489 264 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 CELA2BP08218 269 aaPredicted RBP12.59□□□□□ -0.39
PRDM2-208ENST00000487453 ZNF883P0CG24 379 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 ERVK-10P10266 1014 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 ATP1B2P14415 290 aaPredicted RBP12.59□□□□□ -0.39
PRDM2-208ENST00000487453 OGNP20774 298 aaKnown RBP12.59□□□□□ -0.39
PRDM2-208ENST00000487453 ECHS1P30084 290 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 NSG1P42857 185 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 MAGEA4P43358 317 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 CTSCP53634 463 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 TUBB4BP68371 445 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 B4GALNT1Q00973 533 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 ITIH4Q14624 930 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 PYCR3Q53H96 274 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 HSP90AA5PQ58FG0 334 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 NEPROQ6NW34 567 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 GSPT2Q8IYD1 628 aaKnown RBP12.59□□□□□ -0.39
PRDM2-208ENST00000487453 FSTL5Q8N475 847 aaPredicted RBP12.59□□□□□ -0.39
PRDM2-208ENST00000487453 CLDN19Q8N6F1 224 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 GSDMBQ8TAX9 411 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 CALML6Q8TD86 181 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 SAP25Q8TEE9 199 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 UBXN4Q92575 508 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 SGF29Q96ES7 293 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 TSPYL1Q9H0U9 437 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 OSGEPL1Q9H4B0 414 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 IARS2Q9NSE4 1012 aaKnown RBP12.59□□□□□ -0.39
PRDM2-208ENST00000487453 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 LAMA1P25391 3075 aa12.59□□□□□ -0.39
PRDM2-208ENST00000487453 IGLV3-16A0A075B6K0 115 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 NEMP2A6NFY4 417 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 CHUKO15111 745 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 FLRT2O43155 660 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 PCDHGA12O60330 932 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 OR1I1O60431 355 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 ANXA6P08133 673 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 ALPPL2P10696 532 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 ZNF7P17097 686 aaPredicted RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 AK4P27144 223 aaPredicted RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 SSTR1P30872 391 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 ACTR1BP42025 376 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 SLC1A2P43004 574 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 EIF3BP55884 814 aaKnown RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 ACTR1AP61163 376 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 LRP8Q14114 963 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 SUZ12Q15022 739 aaKnown RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 TYSND1Q2T9J0 566 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms