RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 OR2A14Q96R47 310 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 EPB41L5Q9HCM4 733 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 TRMT1Q9NXH9 659 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 TAAR2Q9P1P5 351 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 MTMR6Q9Y217 621 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 R3HDM2Q9Y2K5 976 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 URB2Q14146 1524 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 PDS5BQ9NTI5 1447 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 CUL7Q14999 1698 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 FRMD3A2A2Y4 597 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 SMAD9O15198 467 aaKnown RBP3.94□□□□□ -1.78
LINC00888-204ENST00000487386 SLC22A3O75751 556 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 OR2C1O95371 312 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 HIST1H2ABP04908 130 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 RARGP13631 454 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 SELLP14151 372 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 HIST1H2ADP20671 130 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 TNFAIP3P21580 790 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 PAX3P23760 479 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 MAPK4P31152 587 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 PIK3CAP42336 1068 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 GALCP54803 685 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 PLIN5Q00G26 463 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 DMP1Q13316 513 aaPredicted RBP3.94□□□□□ -1.78
LINC00888-204ENST00000487386 RBM39Q14498 530 aaKnown RBP3.94□□□□□ -1.78
LINC00888-204ENST00000487386 PCGF3Q3KNV8 242 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 SIRPB2Q5JXA9 342 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 CCNYL2Q5T2Q4 361 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 FAAH2Q6GMR7 532 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 KLHL35Q6PF15 583 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 GSG1LQ6UXU4 331 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 CFAP77Q6ZQR2 320 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 PLEKHM3Q6ZWE6 761 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 HIST3H2AQ7L7L0 130 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 PM20D2Q8IYS1 436 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 GCSAMQ8N6F7 178 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 EMC1Q8N766 993 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 PDILTQ8N807 584 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 LRRC8CQ8TDW0 803 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 UTP15Q8TED0 518 aaKnown RBP3.94□□□□□ -1.78
LINC00888-204ENST00000487386 USP6NLQ92738 828 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 ZKSCAN4Q969J2 545 aaPredicted RBP3.94□□□□□ -1.78
LINC00888-204ENST00000487386 LINGO1Q96FE5 620 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 ZNF583Q96ND8 569 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 GFI1Q99684 422 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 LRMDAQ9H2I8 198 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 SETD4Q9NVD3 440 aa3.94□□□□□ -1.78
LINC00888-204ENST00000487386 CORO1CQ9ULV4 474 aaPredicted RBP3.94□□□□□ -1.78
LINC00888-204ENST00000487386 GREB1LQ9C091 1923 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 POLA1P09884 1462 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 IGLV5-45A0A087WSX0 123 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 PI4KAP2A4QPH2 592 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 PGPEP1LA6NFU8 196 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 PLPP2O43688 288 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 CTSVO60911 334 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 HRH2P25021 359 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 TM4SF1P30408 202 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 AHRP35869 848 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 AMPHP49418 695 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 LINC01547P58512 204 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 DCAF7P61962 342 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 PRAMEP78395 509 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 SETQ01105 290 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 SPOCK1Q08629 439 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 LRMPQ12912 555 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 MAMLD1Q13495 774 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 ASTE1Q2TB18 679 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 GKAP1Q5VSY0 366 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 PLA2G4FQ68DD2 849 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 ZNF449Q6P9G9 518 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 SLC26A9Q7LBE3 791 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 PAF1Q8N7H5 531 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 TEX19Q8NA77 164 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 ANKRD52Q8NB46 1076 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 RBM15BQ8NDT2 890 aaKnown RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 KLHDC9Q8NEP7 349 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 POMGNT1Q8WZA1 660 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 PHF21AQ96BD5 680 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 NEUROD6Q96NK8 337 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 SEMA3CQ99985 751 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 MARCH4Q9P2E8 410 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-204ENST00000487386 LYVE1Q9Y5Y7 322 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 EEA1Q15075 1411 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 CTTNBP2Q8WZ74 1663 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 WDR81Q562E7 1941 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 ADAMTS12P58397 1594 aa3.93□□□□□ -1.78
LINC00888-204ENST00000487386 ANKRD66B4E2M5 251 aa3.92□□□□□ -1.78
LINC00888-204ENST00000487386 BUD23O43709 281 aaKnown RBP3.92□□□□□ -1.78
LINC00888-204ENST00000487386 PRKNO60260 465 aaPredicted RBP3.92□□□□□ -1.78
LINC00888-204ENST00000487386 ZNF217O75362 1048 aa3.92□□□□□ -1.78
LINC00888-204ENST00000487386 TMEM11P17152 192 aa3.92□□□□□ -1.78
LINC00888-204ENST00000487386 ANXA7P20073 488 aaKnown RBP3.92□□□□□ -1.78
LINC00888-204ENST00000487386 HOXA13P31271 388 aaPredicted RBP3.92□□□□□ -1.78
LINC00888-204ENST00000487386 ARL3P36405 182 aa3.92□□□□□ -1.78
LINC00888-204ENST00000487386 CDKN1AP38936 164 aa3.92□□□□□ -1.78
LINC00888-204ENST00000487386 DCTP40126 519 aa3.92□□□□□ -1.78
LINC00888-204ENST00000487386 GPR143P51810 404 aa3.92□□□□□ -1.78
LINC00888-204ENST00000487386 CTSCP53634 463 aa3.92□□□□□ -1.78
LINC00888-204ENST00000487386 MVPQ14764 893 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms