RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 Q71RC1 249 aaPredicted RBP11.47□□□□□ -0.57
TRIM56-204ENST00000487252 RAB43Q86YS6 212 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 GALNT13Q8IUC8 556 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 TMEM139Q8IV31 216 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 PPM1KQ8N3J5 372 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 CLEC1AQ8NC01 280 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 SLC35C1Q96A29 364 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 ZNF514Q96K75 400 aaPredicted RBP11.47□□□□□ -0.57
TRIM56-204ENST00000487252 NT5C1BQ96P26 610 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 TBCBQ99426 244 aa11.47□□□□□ -0.57
TRIM56-204ENST00000487252 LIMA1Q9UHB6 759 aaKnown RBP11.47□□□□□ -0.57
TRIM56-204ENST00000487252 AKAP6Q13023 2319 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 IGHV5-51A0A0C4DH38 117 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 MASP2O00187 686 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 TRAFD1O14545 582 aaPredicted RBP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 MED7O43513 233 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 CREB3O43889 395 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 DNAJC6O75061 913 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 SCRG1O75711 98 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 KLF7O75840 302 aaPredicted RBP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 ERBB2P04626 1255 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 KLK3P07288 261 aaPredicted RBP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 EPB41P11171 864 aaKnown RBP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 IGFBP2P18065 325 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 XRCC1P18887 633 aaPredicted RBP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 CDK11BP21127 795 aaKnown RBP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 ETV3P41162 512 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 ARCN1P48444 511 aaKnown RBP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 SULT1E1P49888 294 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 ACY1Q03154 408 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 COBLL1Q53SF7 1204 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 TMEM198Q66K66 360 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 ADAMTSL4Q6UY14 1074 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 SIDT2Q8NBJ9 832 aaKnown RBP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 DNAJB14Q8TBM8 379 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 NR4A3Q92570 626 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 RSC1A1Q92681 617 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 ZDHHC12Q96GR4 267 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 KREMEN1Q96MU8 473 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 PLEKHG4BQ96PX9 1271 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 SMR3AQ99954 134 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRIM56-204ENST00000487252 B4GALT6Q9UBX8 382 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 STAP1Q9ULZ2 295 aa11.46□□□□□ -0.57
TRIM56-204ENST00000487252 SPTBP11277 2137 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 NUP210LQ5VU65 1888 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 A8MX80 341 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 CCP110O43303 1012 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 HEXIM1O94992 359 aaKnown RBP11.45□□□□□ -0.58
TRIM56-204ENST00000487252 IGHEP01854 428 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 EBLN1P0CF75 366 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 AMD1P17707 334 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 SERPINA4P29622 427 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 HADHAP40939 763 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 POLR2LP62875 67 aaKnown RBP11.45□□□□□ -0.58
TRIM56-204ENST00000487252 PAK1Q13153 545 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 NCF4Q15080 339 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 TLR1Q15399 786 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 DCAF17Q5H9S7 520 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-204ENST00000487252 TCERG1LQ5VWI1 586 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 RAET1GQ6H3X3 334 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 MEX3BQ6ZN04 569 aaKnown RBP11.45□□□□□ -0.58
TRIM56-204ENST00000487252 FAM92BQ6ZTR7 304 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 HSD11B1LQ7Z5J1 315 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 D2HGDHQ8N465 521 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 LZTR1Q8N653 840 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 OR8K5Q8NH50 307 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 ADAMTS18Q8TE60 1221 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 FNIP1Q8TF40 1166 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 UBXN4Q92575 508 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 NRGNQ92686 78 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 COX14Q96I36 57 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 C16orf45Q96MC5 204 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-204ENST00000487252 ATP13A3Q9H7F0 1226 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 CCM2LQ9NUG4 571 aaPredicted RBP11.45□□□□□ -0.58
TRIM56-204ENST00000487252 OR12D3Q9UGF7 316 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
TRIM56-204ENST00000487252 FAM72CH0Y354 149 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 PSMD11O00231 422 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 RGRP47804 291 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 CLCNKAP51800 687 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 SMSP52788 366 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 TUBB4BP68371 445 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 ADAM8P78325 824 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 TUBB2AQ13885 445 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 SSPNQ14714 243 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 SYCP1Q15431 976 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 FAM72AQ5TYM5 149 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 FAM72DQ6L9T8 149 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 TMEM207Q6UWW9 146 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 GFRALQ6UXV0 394 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 CERS6Q6ZMG9 384 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 Q6ZVL8 140 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 MARK2Q7KZI7 788 aaKnown RBP11.44□□□□□ -0.58
TRIM56-204ENST00000487252 RRAGAQ7L523 313 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 TECPR1Q7Z6L1 1165 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 FAM72BQ86X60 149 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 KMT5CQ86Y97 462 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 TMEM126BQ8IUX1 230 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms