RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ATP13A4Q4VNC1 1196 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 CCDC183Q5T5S1 534 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 CACHD1Q5VU97 1274 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 CAPRIN2Q6IMN6 1127 aaKnown RBP19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 FAM92BQ6ZTR7 304 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 PPP1R3BQ86XI6 285 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 GPR26Q8NDV2 337 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 NUP85Q9BW27 656 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 TRIM55Q9BYV6 548 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 ZFYVE1Q9HBF4 777 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 LHX9Q9NQ69 397 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 PLEKHB1Q9UF11 243 aaPredicted RBP19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 VPS4AQ9UN37 437 aa19.13■□□□□ 0.65
SMPDL3A-202ENST00000487215 TTLL8A6PVC2 850 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 AGFG2O95081 481 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 MT-ND3P03897 115 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 ZNF7P17097 686 aaPredicted RBP19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 GJC1P36383 396 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 DCDC1P59894 354 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 GBE1Q04446 702 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 SEMA5AQ13591 1074 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 GPR18Q14330 331 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 ABRAXAS1Q6UWZ7 409 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 LRRTM4Q86VH4 590 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 EFCAB3Q8N7B9 438 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 GLYATL1Q969I3 302 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 ZNF670Q9BS34 389 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 TIMM29Q9BSF4 260 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 ZSCAN5AQ9BUG6 496 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 ADGRE3Q9BY15 652 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 NAT10Q9H0A0 1025 aaKnown RBP19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 BRD8Q9H0E9 1235 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 ACTL8Q9H568 366 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 SLC40A1Q9NP59 571 aa19.12■□□□□ 0.65
SMPDL3A-202ENST00000487215 OR52A4PA6NMU1 304 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 C21orf140B9A014 251 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 KMOO15229 486 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 MTX2O75431 263 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 MBD3O95983 291 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 NELFEP18615 380 aaKnown RBP19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 RPL10P27635 214 aaKnown RBP19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 HADHQ16836 314 aaKnown RBP19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 FHL5Q5TD97 284 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 IRGCQ6NXR0 463 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 CPNE8Q86YQ8 564 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 ZNF547Q8IVP9 402 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 TRAM1L1Q8N609 369 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 GALNT11Q8NCW6 608 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 HDAC11Q96DB2 347 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 ZDHHC12Q96GR4 267 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 RUFY1Q96T51 708 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 NFKBIL1Q9UBC1 381 aaPredicted RBP19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 EPHA6Q9UF33 1036 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 SHOC2Q9UQ13 582 aa19.11■□□□□ 0.65
SMPDL3A-202ENST00000487215 SPTAN1Q13813 2472 aaKnown RBP19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 KCNK1O00180 336 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 JCHAINP01591 159 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 SLC4A1P02730 911 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 CYP1A2P05177 515 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 PIRTP0C851 137 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 MX2P20592 715 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 DRG2P55039 364 aaKnown RBP19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 PPP1CAP62136 330 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 SLC10A2Q12908 348 aaPredicted RBP19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 KHDC1Q4VXA5 237 aaKnown RBP19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 AGAP9Q5VTM2 703 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 HGSNATQ68CP4 663 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 PDPK2PQ6A1A2 396 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 CYB5D1Q6P9G0 228 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 RBM12BQ8IXT5 1001 aaKnown RBP19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 PQLC3Q8N755 202 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 CNTD1Q8N815 330 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 KCTD6Q8NC69 237 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 CPT1CQ8TCG5 803 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 CXorf40BQ96DE9 158 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 TRIB3Q96RU7 358 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 RAB33BQ9H082 229 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 PDE7BQ9NP56 450 aa19.1■□□□□ 0.65
SMPDL3A-202ENST00000487215 MYO1FO00160 1098 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 ZBTB17Q13105 803 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 TUBB3Q13509 450 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 FILIP1LQ4L180 1135 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 FAM182AQ5T1J6 154 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 CPZQ66K79 652 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 PWWP2BQ6NUJ5 590 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 WASH2PQ6VEQ5 465 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 TMC3Q7Z5M5 1100 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 CCNYQ8ND76 341 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 FAF2Q96CS3 445 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 AKIRIN1Q9H9L7 192 aaPredicted RBP19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 WASH6PQ9NQA3 447 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 RAD18Q9NS91 495 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 SEMA5BQ9P283 1151 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 TRIM10Q9UDY6 481 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 RARRES3Q9UL19 164 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 ZNF711Q9Y462 761 aa19.09■□□□□ 0.65
SMPDL3A-202ENST00000487215 IGHV5-51A0A0C4DH38 117 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 VEGFDO43915 354 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 CDK14O94921 469 aa19.08■□□□□ 0.64
SMPDL3A-202ENST00000487215 FOLR1P15328 257 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms