RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CISD1Q9NZ45 108 aaKnown RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 WDR35Q9P2L0 1181 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 AGO2Q9UKV8 859 aaKnown RBP4.08□□□□□ -1.76
PTCD3-216ENST00000487043 ERVK-11Q9UQG0 969 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 EP400Q96L91 3159 aa4.08□□□□□ -1.76
PTCD3-216ENST00000487043 MYH3P11055 1940 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 COL11A2P13942 1736 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 COL24A1Q17RW2 1714 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 DDX60Q8IY21 1712 aaKnown RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 TTC41PQ6P2S7 1318 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 MROH5Q6ZUA9 1318 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 TRBV5-3A0A0A0MS03 114 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 A0A0U1RQG5 324 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 A6NL46 340 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 LINC01548A6NM66 108 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 A8MXE2 369 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 STMND1H3BQB6 276 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 DIAPH2O60879 1101 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 IGLV2-14P01704 120 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 MMP3P08254 477 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 MYBL1P10243 752 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 CHRNB1P11230 501 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 ENO3P13929 434 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 TRIM21P19474 475 aaKnown RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 CPT2P23786 658 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 PPP3CCP48454 512 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 PNLIPRP2P54317 469 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 RAD23AP54725 363 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 CDH12P55289 794 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 RPS13P62277 151 aaKnown RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 PPARDQ03181 441 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 COL10A1Q03692 680 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 ZNF91Q05481 1191 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 DDR1Q08345 913 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 TFCP2Q12800 502 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 GRAPQ13588 217 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 KCNC3Q14003 757 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 BAATQ14032 418 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 C15orf59Q2T9L4 293 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 PCGF3Q3KNV8 242 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 TCP11X2Q5H9J9 407 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 NCAPH2Q6IBW4 605 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 HEPHL1Q6MZM0 1159 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 PRR5LQ6MZQ0 368 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 IL27RAQ6UWB1 636 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 GPSM1Q86YR5 675 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 CEP97Q8IW35 865 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 MINDY1Q8N5J2 469 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 CNBD1Q8NA66 436 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 TDRD5Q8NAT2 981 aaKnown RBP4.07□□□□□ -1.76
PTCD3-216ENST00000487043 KDM1BQ8NB78 822 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 MCUQ8NE86 351 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 SEMA6DQ8NFY4 1073 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 DUSP19Q8WTR2 217 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 TMEM18Q96B42 140 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 RMDN1Q96DB5 314 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 VCPIP1Q96JH7 1222 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 SLC41A2Q96JW4 573 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 PPP1R13BQ96KQ4 1090 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 FAM118BQ9BPY3 351 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 FAM110AQ9BQ89 295 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 CCDC106Q9BWC9 280 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 C1QTNF1Q9BXJ1 281 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 ANKRD2Q9GZV1 360 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 ERVMER34-1Q9H9K5 563 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 GRPEL1Q9HAV7 217 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 CYSLTR2Q9NS75 346 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 ECHDC1Q9NTX5 307 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 TMEM184CQ9NVA4 438 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 PLAGL1Q9UM63 463 aa4.07□□□□□ -1.76
PTCD3-216ENST00000487043 RIC1Q4ADV7 1423 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 ABCC12Q96J65 1359 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 LOC100509620A0A075B734 347 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 A0A1B0GUL7 405 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 A0A1W2PPC1 479 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 TMEM202A6NGA9 273 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 URADA6NGE7 173 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 MANSC4A6NHS7 340 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-216ENST00000487043 A6NNC1 897 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 VCYO14598 125 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 OGG1O15527 345 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 JRKO75564 520 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 HIST1H2ABP04908 130 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 MMP10P09238 476 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 CTSAP10619 480 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 ACTN1P12814 892 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 MMP9P14780 707 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 HIST1H2ADP20671 130 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 MPGP29372 298 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 DCTDP32321 178 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 AVPR1AP37288 418 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 TAS2R40P59535 323 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 TIMM10P62072 90 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 RPS8P62241 208 aaKnown RBP4.06□□□□□ -1.76
PTCD3-216ENST00000487043 MRPS21P82921 87 aaKnown RBP4.06□□□□□ -1.76
PTCD3-216ENST00000487043 FAM27E3Q08E93 113 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 HNRNPA0Q13151 305 aaKnown RBP4.06□□□□□ -1.76
PTCD3-216ENST00000487043 CAMK2DQ13557 499 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 COG2Q14746 738 aa4.06□□□□□ -1.76
PTCD3-216ENST00000487043 DLG2Q15700 870 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms