RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CYP2F1P24903 491 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 EPHA3P29320 983 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ADSSP30520 456 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 NTSR1P30989 418 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 LONP1P36776 959 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 IFNAR2P48551 515 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 LHX1P48742 406 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 MYL7Q01449 175 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 TSPY1Q01534 308 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CREB5Q02930 508 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 DHX8Q14562 1220 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 DMC1Q14565 340 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 MTF1Q14872 753 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ZNF77Q15935 545 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CCDC6Q16204 474 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ZNF750Q32MQ0 723 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ODF3L2Q3SX64 289 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CFAP221Q4G0U5 840 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ZC2HC1CQ53FD0 456 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 DAB2IPQ5VWQ8 1189 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ZNF549Q6P9A3 640 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 USP49Q70CQ1 688 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 EPM2AIP1Q7L775 607 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 TFAP2DQ7Z6R9 452 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 DAAM2Q86T65 1068 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ANKRD13BQ86YJ7 626 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 EFCAB13Q8IY85 973 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 KRT78Q8N1N4 520 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 TMEM86AQ8N2M4 240 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 PDCL2Q8N4E4 241 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 LRRC52Q8N7C0 313 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 C11orf44Q8N8P7 122 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 FSIP1Q8NA03 581 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 RPLP0P6Q8NHW5 317 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 LRRC15Q8TF66 581 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 POMGNT1Q8WZA1 660 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 RAD54LQ92698 747 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CD101Q93033 1021 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ATP2A3Q93084 1043 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 HVCN1Q96D96 273 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CEP295NLQ96MC4 621 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CYP2S1Q96SQ9 504 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 PKMYT1Q99640 499 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 PI4K2AQ9BTU6 479 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 STRA6Q9BX79 667 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ZNF518BQ9C0D4 1074 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 FAM234AQ9H0X4 552 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 HIPK2Q9H2X6 1198 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ZHX3Q9H4I2 956 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 TMLHEQ9NVH6 421 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 DUS2Q9NX74 493 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 GDAP2Q9NXN4 497 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 DDX43Q9NXZ2 648 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 GCNT4Q9P109 453 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 L1RE1Q9UN81 338 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 MAGED2Q9UNF1 606 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 EXOC7Q9UPT5 735 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ACACAQ13085 2346 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 TNRC6BQ9UPQ9 1833 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ADAMTS9Q9P2N4 1935 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 GOLGA4Q13439 2230 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 LNP1A1A4G5 178 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 TMEM8BA6NDV4 472 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 CYSRT1A8MQ03 144 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 K7EQS6 105 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 RASAL1O95294 804 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 NFATC1O95644 943 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 CEACAM1P13688 526 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 PLA2G2AP14555 144 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 GAP43P17677 238 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 CSRP1P21291 193 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 ACAT1P24752 427 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 GJB2P29033 226 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 PRKAR1BP31321 381 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 OPRD1P41143 372 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 MAGEA11P43364 429 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 PPP3CCP48454 512 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 PTDSS1P48651 473 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 NOVA1P51513 510 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 SUMO3P55854 103 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 RPS13P62277 151 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 RBP5P82980 135 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 TFAMQ00059 246 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 MAPRE1Q15691 268 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 SOWAHAQ2M3V2 549 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 C4orf46Q504U0 113 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 SPDYCQ5MJ68 293 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 CACHD1Q5VU97 1274 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 SDHAF4Q5VUM1 108 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 PMS2CLQ68D20 193 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 TCEAL6Q6IPX3 200 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 FAM171BQ6P995 826 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 VSTM1Q6UX27 236 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 C4orf50Q6ZRC1 276 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 SFR1Q86XK3 245 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 SPATA2LQ8IUW3 424 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 BRSK2Q8IWQ3 736 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 MMP21Q8N119 569 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 CSGALNACT2Q8N6G5 542 aa4.17□□□□□ -1.74
SNRNP40-205ENST00000486941 ARL14EPQ8N8R7 260 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms