RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NUDT4Q9NZJ9 180 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 EIF2B4Q9UI10 523 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 VPS51Q9UID3 782 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 SNX13Q9Y5W8 968 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 SLC30A1Q9Y6M5 507 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 ANAPC1Q9H1A4 1944 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 ZNF839A8K0R7 811 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 CSPG5O95196 566 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 HMGCLP35914 325 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 GRIA3P42263 894 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 BNIP2Q12982 314 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 TGFBIQ15582 683 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 CNPY1Q3B7I2 92 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 SPATS1Q496A3 300 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 ATXN7L2Q5T6C5 722 aaPredicted RBP17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 HMBOX1Q6NT76 420 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 TMEM150AQ86TG1 271 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 GALNT15Q8N3T1 639 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 LRRC58Q96CX6 371 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 ALG14Q96F25 216 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 PDLIM5Q96HC4 596 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 ZNF597Q96LX8 424 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 PLEKHG4BQ96PX9 1271 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 ZNF382Q96SR6 550 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 CCT7Q99832 543 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 SLC2A11Q9BYW1 496 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 GPR63Q9BZJ6 419 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 TRIM15Q9C019 465 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 BRINP2Q9C0B6 783 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 SARS2Q9NP81 518 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 CMTM6Q9NX76 183 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 DNMT3BQ9UBC3 853 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 PCDHGB4Q9UN71 923 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 DHRS7Q9Y394 339 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 PCDHB1Q9Y5F3 818 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 PCDHGB5Q9Y5G0 923 aa17.79■□□□□ 0.44
PDLIM7-207ENST00000486828 A0A1W2PP18 115 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 TYW5A2RUC4 315 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 AQP12BA6NM10 295 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 GPR39O43194 453 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 TNFAIP8O95379 198 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 PRAMEF12O95522 483 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 SLC6A2P23975 617 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 CSKP41240 450 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 KCNK10P57789 538 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 AP1S1P61966 158 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 IKBKEQ14164 716 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 RCAN2Q14206 197 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 CAPRIN1Q14444 709 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 MTX3Q5HYI7 312 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 CERS6Q6ZMG9 384 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 LYSMD3Q7Z3D4 306 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 DNAJB7Q7Z6W7 309 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 AQP12AQ8IXF9 295 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 DCAF4L2Q8NA75 395 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 ESAMQ96AP7 390 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 EID2BQ96D98 161 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 MYO19Q96H55 970 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 TMEM106CQ9BVX2 250 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 HIPK3Q9H422 1215 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 ZNF696Q9H7X3 374 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 PLK2Q9NYY3 685 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 ASB1Q9Y576 335 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 GOLGA8CPA6NN73 597 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 IQCF5A8MTL0 148 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 GFRA2O00451 464 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 PRMT5O14744 637 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 SCAMP3O14828 347 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 GREM1O60565 184 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 OR4F21O95013 312 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 PGLSO95336 258 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 FAM58BPP0C7Q3 252 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 CTPS1P17812 591 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 ZFP36L2P47974 494 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 POLE2P56282 527 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 ERVK-8P63133 956 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 MYBPC1Q00872 1141 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 GK3PQ14409 553 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 PDCD4Q53EL6 469 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 ARMC12Q5T9G4 340 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 DEFB128Q7Z7B8 93 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 GOLM1Q8NBJ4 401 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 SPDYE1Q8NFV5 336 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 OR2T11Q8NH01 316 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 ADAMTS19Q8TE59 1207 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 CANT1Q8WVQ1 401 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 PIH1D2Q8WWB5 315 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 TRIM54Q9BYV2 358 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 EPB41L1Q9H4G0 881 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 RIC8BQ9NVN3 520 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 PCDHA9Q9Y5H5 950 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 PLXNA4Q9HCM2 1894 aa17.78■□□□□ 0.44
PDLIM7-207ENST00000486828 SMIM31A0A1B0GVY4 71 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 C7orf72A4D263 438 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 CDH18Q13634 790 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 NRF1Q16656 503 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 THEMIS2Q5TEJ8 643 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 LCN8Q6JVE9 175 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 SCIMPQ6UWF3 145 aa17.77■□□□□ 0.44
PDLIM7-207ENST00000486828 ERMP1Q7Z2K6 904 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms