RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 IGHV1OR21-1A0A087WYE8 117 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 A0A1W2PNU3 283 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-208ENST00000486404 C5orf60A6NFR6 353 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 OR5K4A6NMS3 321 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 PPM1DO15297 605 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 EML2O95834 649 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 HGFP14210 728 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 ZNF7P17097 686 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-208ENST00000486404 MSH3P20585 1137 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 ITPKBP27987 946 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 KLF1Q13351 362 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-208ENST00000486404 OLIG2Q13516 323 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 GSE1Q14687 1217 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 RPS6KA1Q15418 735 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 CHRNA6Q15825 494 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 NKAIN2Q5VXU1 208 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 USP53Q70EK8 1073 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 SLITRK4Q8IW52 837 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 SPACA3Q8IXA5 215 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 DDHD1Q8NEL9 900 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 CCDC74BQ96LY2 380 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 DPYSL5Q9BPU6 564 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 TMEM121Q9BTD3 319 aa12.71□□□□□ -0.37
CHMP3-208ENST00000486404 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-208ENST00000486404 SARS2Q9NP81 518 aaKnown RBP12.71□□□□□ -0.37
CHMP3-208ENST00000486404 FEZ2Q9UHY8 353 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-208ENST00000486404 R3HDM2Q9Y2K5 976 aaKnown RBP12.71□□□□□ -0.37
CHMP3-208ENST00000486404 CELSR3Q9NYQ7 3312 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 PTPRQQ9UMZ3 2332 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 CHUKO15111 745 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 GPR39O43194 453 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 KLK10O43240 276 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 B4GAT1O43505 415 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 CSF2RBP32927 897 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 ADRA1AP35348 466 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 CLCNKAP51800 687 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 MAPK10P53779 464 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 UCNP55089 124 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 SEPT6Q14141 434 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 SPARCL1Q14515 664 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 PARP6Q2NL67 630 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 KHDC1Q4VXA5 237 aaKnown RBP12.7□□□□□ -0.38
CHMP3-208ENST00000486404 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 CLEC14AQ86T13 490 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 TAB3Q8N5C8 712 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-208ENST00000486404 OR4K2Q8NGD2 314 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 OR4D9Q8NGE8 314 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 SLC35B2Q8TB61 432 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 DTX3LQ8TDB6 740 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 ATG4AQ8WYN0 398 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 FCRL3Q96P31 734 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-208ENST00000486404 FRMD8P1Q9BZ68 369 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-208ENST00000486404 SEMA6CQ9H3T2 930 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 PRDM8Q9NQV8 689 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 SMOXQ9NWM0 555 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 FKBPLQ9UIM3 349 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 CRLS1Q9UJA2 301 aa12.7□□□□□ -0.38
CHMP3-208ENST00000486404 IGHV5-10-1A0A0J9YXX1 117 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 A6NCN8 305 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 OR2AG2A6NM03 316 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 CDRT15L2A8MXV6 281 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 E7EVH7 732 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 HGSO14964 777 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-208ENST00000486404 UGT1A9O60656 530 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 GAS8O95995 478 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 VIPP01282 170 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 IFNB1P01574 187 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 UGT1A6P19224 532 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 ITGALP20701 1170 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 IDSP22304 550 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 UGT1A1P22309 533 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 UGT1A4P22310 534 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 CD1CP29017 333 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 PBLDP30039 288 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-208ENST00000486404 UGT1A3P35503 534 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 HADHAP40939 763 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 HALP42357 657 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 LMAN1P49257 510 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 EPHA4P54764 986 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 GDF10P55107 478 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 TMPRSS3P57727 454 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 CXADRP78310 365 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 TMPRSS15P98073 1019 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 TLE3Q04726 772 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 ZFP36L1Q07352 338 aaKnown RBP12.69□□□□□ -0.38
CHMP3-208ENST00000486404 TMEM115Q12893 351 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-208ENST00000486404 TRA2AQ13595 282 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHMP3-208ENST00000486404 LONRF2Q1L5Z9 754 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-208ENST00000486404 GPRC6AQ5T6X5 926 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 TMEM164Q5U3C3 297 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 RANBP10Q6VN20 620 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 TMPRSS9Q7Z410 1059 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 CCDC89Q8N998 374 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 RCBTB1Q8NDN9 531 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 ULK4Q96C45 1275 aa12.69□□□□□ -0.38
CHMP3-208ENST00000486404 CXorf40BQ96DE9 158 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms