RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 SDK2Q58EX2 2172 aa22.09■■□□□ 1.13
SREBF1-214ENST00000486311 TLN1Q9Y490 2541 aaKnown RBP22.09■■□□□ 1.13
SREBF1-214ENST00000486311 MTSS1O43312 755 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 MTX2O75431 263 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 CDK14O94921 469 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 VIPP01282 170 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 EPOP01588 193 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 ANKRD34CP0C6C1 535 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 HMGCLP35914 325 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 SLC19A1P41440 591 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 WNT3AP56704 352 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 KHDC1Q4VXA5 237 aaKnown RBP22.08■■□□□ 1.13
SREBF1-214ENST00000486311 TMEM26Q6ZUK4 368 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 RNF214Q8ND24 703 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 CTRCQ99895 268 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 TRABDQ9H4I3 376 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 BPIFA1Q9NP55 256 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 OGFRQ9NZT2 677 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 ZNF624Q9P2J8 865 aaPredicted RBP22.08■■□□□ 1.13
SREBF1-214ENST00000486311 KLHL3Q9UH77 587 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 DNAJC16Q9Y2G8 782 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 ALG6Q9Y672 507 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 BSNQ9UPA5 3926 aa22.08■■□□□ 1.13
SREBF1-214ENST00000486311 C9P02748 559 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 NFKB1P19838 968 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 ADCY2Q08462 1091 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 LLGL1Q15334 1064 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 ATP13A5Q4VNC0 1218 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 KAZNQ674X7 775 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 ABRAXAS1Q6UWZ7 409 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 NLGN4XQ8N0W4 816 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 NLGN4YQ8NFZ3 816 aaPredicted RBP22.07■■□□□ 1.12
SREBF1-214ENST00000486311 DTX3LQ8TDB6 740 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 FAM117AQ9C073 453 aa22.07■■□□□ 1.12
SREBF1-214ENST00000486311 PDZK1P1A8MUH7 402 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 CAPN5O15484 640 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-214ENST00000486311 BRAFP15056 766 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 MAP4P27816 1152 aaKnown RBP22.06■■□□□ 1.12
SREBF1-214ENST00000486311 MAGEA1P43355 309 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 CLCA4Q14CN2 919 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 NOMO1Q15155 1222 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 TFDP3Q5H9I0 405 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 AGAP9Q5VTM2 703 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 ZDHHC20Q5W0Z9 365 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 WASH2PQ6VEQ5 465 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 C11orf96Q7Z7L8 435 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 TRIM48Q8IWZ4 208 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 KATNAL2Q8IYT4 538 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 TTC30BQ8N4P2 665 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 P3H4Q92791 437 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 C9orf72Q96LT7 481 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 FCRL5Q96RD9 977 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 VAT1Q99536 393 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 APMAPQ9HDC9 416 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 IL26Q9NPH9 171 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 WASH6PQ9NQA3 447 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 POT1Q9NUX5 634 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 GEMIN8Q9NWZ8 242 aaKnown RBP22.06■■□□□ 1.12
SREBF1-214ENST00000486311 SIDT1Q9NXL6 827 aaKnown RBP22.06■■□□□ 1.12
SREBF1-214ENST00000486311 KLHL8Q9P2G9 620 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-214ENST00000486311 TMEM184BQ9Y519 407 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-214ENST00000486311 HEMK1Q9Y5R4 338 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-214ENST00000486311 SLC30A1Q9Y6M5 507 aa22.06■■□□□ 1.12
SREBF1-214ENST00000486311 hCG_1818297A0A087WSY0 165 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 ZNF891A8MT65 544 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-214ENST00000486311 POLR1CO15160 346 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-214ENST00000486311 UBXN7O94888 489 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 ZRANB2O95218 330 aaKnown RBP eCLIP22.05■■□□□ 1.12
SREBF1-214ENST00000486311 IDSP22304 550 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 GFERP55789 205 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 TMEM115Q12893 351 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-214ENST00000486311 SEPT7Q16181 437 aaKnown RBP22.05■■□□□ 1.12
SREBF1-214ENST00000486311 SIRPB2Q5JXA9 342 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 BORAQ6PGQ7 559 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 TIPARPQ7Z3E1 657 aaKnown RBP22.05■■□□□ 1.12
SREBF1-214ENST00000486311 PRICKLE2Q7Z3G6 844 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 ZC3H18Q86VM9 953 aaKnown RBP22.05■■□□□ 1.12
SREBF1-214ENST00000486311 RCOR2Q8IZ40 523 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 ZNF567Q8N184 647 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 BRSK1Q8TDC3 778 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 OXNAD1Q96HP4 312 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-214ENST00000486311 SLC45A3Q96JT2 553 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 MRGPRX2Q96LB1 330 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 GOLPH3Q9H4A6 298 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 IL17CQ9P0M4 197 aa22.05■■□□□ 1.12
SREBF1-214ENST00000486311 TOX3O15405 576 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-214ENST00000486311 STK17BO94768 372 aa22.04■■□□□ 1.12
SREBF1-214ENST00000486311 LCA5LO95447 670 aa22.04■■□□□ 1.12
SREBF1-214ENST00000486311 TYRP1P17643 537 aa22.04■■□□□ 1.12
SREBF1-214ENST00000486311 RPL10P27635 214 aaKnown RBP22.04■■□□□ 1.12
SREBF1-214ENST00000486311 CHRNA4P43681 627 aa22.04■■□□□ 1.12
SREBF1-214ENST00000486311 TNNT3P45378 269 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-214ENST00000486311 GTF2H3Q13889 308 aa22.04■■□□□ 1.12
SREBF1-214ENST00000486311 TRAPPC5Q8IUR0 188 aa22.04■■□□□ 1.12
SREBF1-214ENST00000486311 RBM12BQ8IXT5 1001 aaKnown RBP22.04■■□□□ 1.12
SREBF1-214ENST00000486311 SLC25A41Q8N5S1 370 aa22.04■■□□□ 1.12
SREBF1-214ENST00000486311 GDAP1Q8TB36 358 aa22.04■■□□□ 1.12
SREBF1-214ENST00000486311 QKIQ96PU8 341 aaKnown RBP eCLIP22.04■■□□□ 1.12
SREBF1-214ENST00000486311 TRIT1Q9H3H1 467 aaKnown RBP22.04■■□□□ 1.12
SREBF1-214ENST00000486311 GPN2Q9H9Y4 310 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms