RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 PRAMEF10O60809 474 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 CDK14O94921 469 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 PTMAP06454 111 aaKnown RBP13.45□□□□□ -0.26
DCLK1-207ENST00000486239 PIRTP0C851 137 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 PYGMP11217 842 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 HGFP14210 728 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 XRCC1P18887 633 aaPredicted RBP13.45□□□□□ -0.26
DCLK1-207ENST00000486239 MAPK10P53779 464 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 KIF5AQ12840 1032 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 C16orf72Q14CZ0 275 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 SIRPB2Q5JXA9 342 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 MANEAQ5SRI9 462 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 ARHGAP40Q5TG30 622 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 AGAP9Q5VTM2 703 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 USP53Q70EK8 1073 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 ADGRG6Q86SQ4 1221 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 KIAA1328Q86T90 577 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 TRIM48Q8IWZ4 208 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 IPMKQ8NFU5 416 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 GDAP1Q8TB36 358 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 KRT35Q92764 455 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 USP7Q93009 1102 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 MRGPRX2Q96LB1 330 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 BAG1Q99933 345 aaPredicted RBP13.45□□□□□ -0.26
DCLK1-207ENST00000486239 GOLPH3Q9H4A6 298 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 OSGEPL1Q9H4B0 414 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 CPNE5Q9HCH3 593 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 PLEKHM1Q9Y4G2 1056 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 DNMT3AQ9Y6K1 912 aaPredicted RBP13.45□□□□□ -0.26
DCLK1-207ENST00000486239 MGAQ8IWI9 3026 aa13.45□□□□□ -0.26
DCLK1-207ENST00000486239 BAHCC1Q9P281 2608 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 GLYATL1P3A0A0U1RQE8 302 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 MACROD2A1Z1Q3 448 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 PMS2P1A4D2B8 440 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 PDZK1P1A8MUH7 402 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 TOX3O15405 576 aaPredicted RBP13.44□□□□□ -0.26
DCLK1-207ENST00000486239 KALRNO60229 2985 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 SNX2O60749 519 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 VIPP01282 170 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 ITGB2P05107 769 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 ANKRD34CP0C6C1 535 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 ZNF7P17097 686 aaPredicted RBP13.44□□□□□ -0.26
DCLK1-207ENST00000486239 ITIH1P19827 911 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 IDSP22304 550 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 CDC25BP30305 580 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 CSF2RBP32927 897 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 HALP42357 657 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 MARCKSL1P49006 195 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 DMPKQ09013 629 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 DCAF12Q5T6F0 453 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 ZNF574Q6ZN55 896 aaPredicted RBP13.44□□□□□ -0.26
DCLK1-207ENST00000486239 TMPRSS9Q7Z410 1059 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 TRAPPC5Q8IUR0 188 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 DDHD1Q8NEL9 900 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 BLOC1S5Q8TDH9 187 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 BBC3Q96PG8 261 aaPredicted RBP13.44□□□□□ -0.26
DCLK1-207ENST00000486239 KLC4Q9NSK0 619 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 UBP1Q9NZI7 540 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 IL17CQ9P0M4 197 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 SPO11Q9Y5K1 396 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 COL6A6A6NMZ7 2263 aa13.44□□□□□ -0.26
DCLK1-207ENST00000486239 ATMQ13315 3056 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 MN1Q10571 1320 aaPredicted RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 C5orf60A6NFR6 353 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 C9orf172C9J069 976 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 STX7O15400 261 aaKnown RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 CAPN5O15484 640 aaPredicted RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 CRTAMO95727 393 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 RBP3P10745 1247 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 EIF3EP60228 445 aaKnown RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 UBE2IP63279 158 aaKnown RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 OTUD4Q01804 1114 aaKnown RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 ADCY2Q08462 1091 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 TMEM115Q12893 351 aaPredicted RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 NFATC2Q13469 925 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 COL9A2Q14055 689 aaPredicted RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 LONRF2Q1L5Z9 754 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 ATP13A5Q4VNC0 1218 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 CRTC3Q6UUV7 619 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 ABRAXAS1Q6UWZ7 409 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 CEACAM20Q6UY09 585 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 PEX26Q7Z412 305 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 DTX1Q86Y01 620 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 TTC30BQ8N4P2 665 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 BEND7Q8N7W2 519 aaPredicted RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 ACTL9Q8TC94 416 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 HEXDCQ8WVB3 486 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 SGF29Q96ES7 293 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 OXNAD1Q96HP4 312 aaPredicted RBP13.43□□□□□ -0.26
DCLK1-207ENST00000486239 EFHD1Q9BUP0 239 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 HEMGNQ9BXL5 484 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 IL26Q9NPH9 171 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 AMFRQ9UKV5 643 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 ZKSCAN5Q9Y2L8 839 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 PRKAB1Q9Y478 270 aa13.43□□□□□ -0.26
DCLK1-207ENST00000486239 ZNF500O60304 480 aaPredicted RBP13.42□□□□□ -0.26
DCLK1-207ENST00000486239 RALBP11234 206 aa13.42□□□□□ -0.26
DCLK1-207ENST00000486239 LPOP22079 712 aaPredicted RBP13.42□□□□□ -0.26
DCLK1-207ENST00000486239 RBL1P28749 1068 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms