RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TM7SF3Q9NS93 570 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 ZDHHC18Q9NUE0 388 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 NFU1Q9UMS0 254 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 OAS3Q9Y6K5 1087 aaKnown RBP11.26□□□□□ -0.61
NUP50-216ENST00000486184 DGKBQ9Y6T7 804 aa11.26□□□□□ -0.61
NUP50-216ENST00000486184 TRBV5-4A0A0C4DH59 114 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 ZCWPW2A0A1B0GU75 182 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 OR2AG2A6NM03 316 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 AGAP14A8MT82 685 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 GOLGA8KD6RF30 607 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 GOLGA8TH3BQL2 631 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 QSOX1O00391 747 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 SCAMP1O15126 338 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 KMOO15229 486 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 AQP9O43315 295 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 GRID2O43424 1007 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 PIAS2O75928 621 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 ANXA6P08133 673 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 ZNF883P0CG24 379 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 PRSS56P0CW18 603 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 ALPPL2P10696 532 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 ATP1B2P14415 290 aaPredicted RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 ZNF7P17097 686 aaPredicted RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 ZNF8P17098 575 aaPredicted RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 VCLP18206 1134 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 OGNP20774 298 aaKnown RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 PLA2G5P39877 138 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 NSG1P42857 185 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 MAGEA4P43358 317 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 RXRGP48443 463 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 CARSP49589 748 aaKnown RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 CDKN1CP49918 316 aaPredicted RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 LRP8Q14114 963 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 FASTKD3Q14CZ7 662 aaKnown RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 TCEA2Q15560 299 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 DBN1Q16643 649 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 INSCQ1MX18 579 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 PLA2G4EQ3MJ16 856 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 ZNF470Q6ECI4 717 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 NEPROQ6NW34 567 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 UNC5AQ6ZN44 842 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 DET1Q7L5Y6 550 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 CHST15Q7LFX5 561 aaPredicted RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 GKN2Q86XP6 184 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 IGDCC3Q8IVU1 814 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 ZNF548Q8NEK5 533 aaPredicted RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 GSDMBQ8TAX9 411 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 SCG3Q8WXD2 468 aaKnown RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 CERS2Q96G23 380 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 FCRL3Q96P31 734 aaPredicted RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 TSSK1BQ9BXA7 367 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 GSDMCQ9BYG8 508 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 CLPBQ9H078 707 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 VPS37BQ9H9H4 285 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 DNAAF2Q9NVR5 837 aaKnown RBP11.25□□□□□ -0.61
NUP50-216ENST00000486184 IL1RAPL1Q9NZN1 696 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 TMPRSS11EQ9UL52 423 aa11.25□□□□□ -0.61
NUP50-216ENST00000486184 GPR179Q6PRD1 2367 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.24□□□□□ -0.61
NUP50-216ENST00000486184 UBA6A0AVT1 1052 aaPredicted RBP11.24□□□□□ -0.61
NUP50-216ENST00000486184 C2orf72A6NCS6 295 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 C4orf47A7E2U8 309 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 DNAJC6O75061 913 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 SPAG6O75602 509 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 GSTA2P09210 222 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 OR56A5P0C7T3 313 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 ACP5P13686 325 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 TGM1P22735 817 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 MCM3P25205 808 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 PHBP35232 272 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 ARCN1P48444 511 aaKnown RBP11.24□□□□□ -0.61
NUP50-216ENST00000486184 ARHGAP8P85298 464 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 BNIP3Q12983 259 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 SLC14A1Q13336 389 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 SLMAPQ14BN4 828 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 KHDC1Q4VXA5 237 aaKnown RBP11.24□□□□□ -0.61
NUP50-216ENST00000486184 PYCR3Q53H96 274 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 HSP90AA5PQ58FG0 334 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 STPG1Q5TH74 334 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 STEAP4Q687X5 459 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 TMEM220Q6QAJ8 160 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 PACS1Q6VY07 963 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 TAF8Q7Z7C8 310 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 GATAD2AQ86YP4 633 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 PIANPQ8IYJ0 282 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 RASGEF1AQ8N9B8 481 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 GPR150Q8NGU9 434 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 CDKL2Q92772 493 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 C9orf72Q96LT7 481 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 TCF12Q99081 682 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 LRRC61Q9BV99 259 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 TMEM168Q9H0V1 697 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 CCDC68Q9H2F9 335 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 TCEAL2Q9H3H9 227 aaPredicted RBP11.24□□□□□ -0.61
NUP50-216ENST00000486184 OSGEPL1Q9H4B0 414 aa11.24□□□□□ -0.61
NUP50-216ENST00000486184 IARS2Q9NSE4 1012 aaKnown RBP11.24□□□□□ -0.61
NUP50-216ENST00000486184 TRNAU1APQ9NX07 287 aaKnown RBP11.24□□□□□ -0.61
NUP50-216ENST00000486184 ZFATQ9P243 1243 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms