RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 COPS2P61201 443 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 RPS18P62269 152 aaKnown RBP9.74□□□□□ -0.85
SND1-213ENST00000486037 GNA12Q03113 381 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 SLC20A2Q08357 652 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 MMRN1Q13201 1228 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 KLF1Q13351 362 aaPredicted RBP9.74□□□□□ -0.85
SND1-213ENST00000486037 DPYSL3Q14195 570 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 PPP2R5EQ16537 467 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 ERCC6LQ2NKX8 1250 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 ERMARDQ5T6L9 678 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 SLC30A9Q6PML9 568 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 PRELID2Q8N945 189 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 ATL2Q8NHH9 583 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 NTAN1Q96AB6 310 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 KCTD15Q96SI1 283 aaPredicted RBP9.74□□□□□ -0.85
SND1-213ENST00000486037 ZPBPQ9BS86 351 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 ULBP3Q9BZM4 244 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 CARS2Q9HA77 564 aaKnown RBP9.74□□□□□ -0.85
SND1-213ENST00000486037 PCDH12Q9NPG4 1184 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 SLAMF7Q9NQ25 335 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 FZD10Q9ULW2 581 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 AP4E1Q9UPM8 1137 aa9.74□□□□□ -0.85
SND1-213ENST00000486037 PCDHGA9Q9Y5G4 932 aaKnown RBP9.74□□□□□ -0.85
SND1-213ENST00000486037 PKDREJQ9NTG1 2253 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 ARGFXA6NJG6 315 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 PRSS44E7EML9 344 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 CCDC188H7C350 402 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 CACNB4O00305 520 aaPredicted RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 TNFRSF10CO14798 259 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 POLR1CO15160 346 aaPredicted RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 ZG16O60844 167 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 POP4O95707 220 aaKnown RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 F9P00740 461 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 IL4RP24394 825 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 NFKBIAP25963 317 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 ADRA1BP35368 520 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 CETN2P41208 172 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 MRPS25P82663 173 aaKnown RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 KRT81Q14533 505 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 AGERQ15109 404 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 ZRSR2Q15696 482 aaKnown RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 DPYSL2Q16555 572 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 CYP1B1Q16678 543 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 ODF2Q5BJF6 829 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 TFDP3Q5H9I0 405 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 KAZNQ674X7 775 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 C6orf15Q6UXA7 325 aaPredicted RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 KLHL7Q8IXQ5 586 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 PYROXD2Q8N2H3 581 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 CISD2Q8N5K1 135 aaKnown RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 KCTD6Q8NC69 237 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 CT55Q8WUE5 264 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 UBXN4Q92575 508 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 HMCESQ96FZ2 354 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 KRT12Q99456 494 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 NAP1L3Q99457 506 aaPredicted RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 NUDT9Q9BW91 350 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 OSBPL1AQ9BXW6 950 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 DDX47Q9H0S4 455 aaKnown RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 DHX35Q9H5Z1 703 aaKnown RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 AKIRIN1Q9H9L7 192 aaPredicted RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 KLHL3Q9UH77 587 aa9.73□□□□□ -0.85
SND1-213ENST00000486037 R3HDM2Q9Y2K5 976 aaKnown RBP9.73□□□□□ -0.85
SND1-213ENST00000486037 ZSCAN5CA6NGD5 496 aaPredicted RBP9.72□□□□□ -0.85
SND1-213ENST00000486037 PHF2O75151 1096 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 RECQL5O94762 991 aaPredicted RBP9.72□□□□□ -0.85
SND1-213ENST00000486037 KIAA0754O94854 1291 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 EML2O95834 649 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 CEACAM5P06731 702 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 RHOXF2BP0C7M4 288 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 TRIM23P36406 574 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 MMP12P39900 470 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 GNPDA1P46926 289 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 SNRPD1P62314 119 aaKnown RBP9.72□□□□□ -0.85
SND1-213ENST00000486037 SH3BP2P78314 561 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 CTBSQ01459 385 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 RALGDSQ12967 914 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 BIRC2Q13490 618 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 DNASE1L3Q13609 305 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 IL10RAQ13651 578 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 PDK2Q15119 407 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 PLEKHN1Q494U1 663 aaPredicted RBP9.72□□□□□ -0.85
SND1-213ENST00000486037 PPP6R3Q5H9R7 873 aaPredicted RBP9.72□□□□□ -0.85
SND1-213ENST00000486037 TTC27Q6P3X3 843 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 ZNF783Q6ZMS7 281 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 ZNF517Q6ZMY9 492 aaPredicted RBP9.72□□□□□ -0.85
SND1-213ENST00000486037 BBS12Q6ZW61 710 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 PSTKQ8IV42 348 aaKnown RBP9.72□□□□□ -0.85
SND1-213ENST00000486037 PQLC3Q8N755 202 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 MAIP1Q8WWC4 291 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 C1orf54Q8WWF1 131 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 ATG4AQ8WYN0 398 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 PNPLA2Q96AD5 504 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 FAF2Q96CS3 445 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 ELMO2Q96JJ3 720 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 RNF157Q96PX1 679 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 DPYSL5Q9BPU6 564 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 FAM118BQ9BPY3 351 aa9.72□□□□□ -0.85
SND1-213ENST00000486037 RHOXF2Q9BQY4 288 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms