RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CAPN5O15484 640 aaPredicted RBP16.89■□□□□ 0.29
SMC4-216ENST00000485645 CST8O60676 142 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 PPFIA2O75334 1257 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 SLC19A1P41440 591 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 CDKN2BP42772 138 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 TNNT3P45378 269 aaPredicted RBP16.89■□□□□ 0.29
SMC4-216ENST00000485645 CLCA4Q14CN2 919 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 SEPT7Q16181 437 aaKnown RBP16.89■□□□□ 0.29
SMC4-216ENST00000485645 KAZNQ674X7 775 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 BORAQ6PGQ7 559 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 TMEM26Q6ZUK4 368 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 KIAA1143Q96AT1 154 aaPredicted RBP16.89■□□□□ 0.29
SMC4-216ENST00000485645 VPS35Q96QK1 796 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 APMAPQ9HDC9 416 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 BPIFA1Q9NP55 256 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 GEMIN8Q9NWZ8 242 aaKnown RBP16.89■□□□□ 0.29
SMC4-216ENST00000485645 SPO11Q9Y5K1 396 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 MN1Q10571 1320 aaPredicted RBP16.89■□□□□ 0.29
SMC4-216ENST00000485645 ASH1LQ9NR48 2969 aaKnown RBP16.89■□□□□ 0.29
SMC4-216ENST00000485645 TLN1Q9Y490 2541 aaKnown RBP16.89■□□□□ 0.29
SMC4-216ENST00000485645 LOC285095A0A1B0GVY8 99 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 ZNF891A8MT65 544 aaPredicted RBP16.88■□□□□ 0.29
SMC4-216ENST00000485645 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
SMC4-216ENST00000485645 MTSS1O43312 755 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 PSTPIP1O43586 416 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 UBXN7O94888 489 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 ANKRD34CP0C6C1 535 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 TYRP1P17643 537 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 AMD1P17707 334 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 CD68P34810 354 aaPredicted RBP16.88■□□□□ 0.29
SMC4-216ENST00000485645 HMGCLP35914 325 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 KCNC4Q03721 635 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 WASHC5Q12768 1159 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 LLGL1Q15334 1064 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 TAZQ16635 292 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 ATP13A5Q4VNC0 1218 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 SPOCD1Q6ZMY3 1216 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 ZNF547Q8IVP9 402 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 GDAP1Q8TB36 358 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 P3H4Q92791 437 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 SLC45A3Q96JT2 553 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 EFHD1Q9BUP0 239 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 SLC25A18Q9H1K4 315 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 TRIT1Q9H3H1 467 aaKnown RBP16.88■□□□□ 0.29
SMC4-216ENST00000485645 TRABDQ9H4I3 376 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 CLMPQ9H6B4 373 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 GPN2Q9H9Y4 310 aaPredicted RBP16.88■□□□□ 0.29
SMC4-216ENST00000485645 POT1Q9NUX5 634 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 ZNF624Q9P2J8 865 aaPredicted RBP16.88■□□□□ 0.29
SMC4-216ENST00000485645 ALG6Q9Y672 507 aa16.88■□□□□ 0.29
SMC4-216ENST00000485645 STK17BO94768 372 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 WISP1O95388 367 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 EPOP01588 193 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 C9P02748 559 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 PECAM1P16284 738 aaPredicted RBP16.87■□□□□ 0.29
SMC4-216ENST00000485645 VCLP18206 1134 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 NFKB1P19838 968 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 IDSP22304 550 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 RPL10P27635 214 aaKnown RBP16.87■□□□□ 0.29
SMC4-216ENST00000485645 GFERP55789 205 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 WNT3AP56704 352 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 NFKB2Q00653 900 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 ABHD18Q0P651 414 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 TMEM115Q12893 351 aaPredicted RBP16.87■□□□□ 0.29
SMC4-216ENST00000485645 GTF2H3Q13889 308 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 KHDC1Q4VXA5 237 aaKnown RBP16.87■□□□□ 0.29
SMC4-216ENST00000485645 ZDHHC20Q5W0Z9 365 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 KDELC1Q6UW63 502 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 ABRAXAS1Q6UWZ7 409 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 WASH2PQ6VEQ5 465 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 TIPARPQ7Z3E1 657 aaKnown RBP16.87■□□□□ 0.29
SMC4-216ENST00000485645 TRAPPC5Q8IUR0 188 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 BRSK1Q8TDC3 778 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 C9orf72Q96LT7 481 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 TTC25Q96NG3 672 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 CATSPER2Q96P56 530 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 ADNPQ9H2P0 1102 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 WASH6PQ9NQA3 447 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 OGFRQ9NZT2 677 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 KLHL8Q9P2G9 620 aaPredicted RBP16.87■□□□□ 0.29
SMC4-216ENST00000485645 TMPRSS11EQ9UL52 423 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 TMEM184BQ9Y519 407 aaPredicted RBP16.87■□□□□ 0.29
SMC4-216ENST00000485645 SLC30A1Q9Y6M5 507 aa16.87■□□□□ 0.29
SMC4-216ENST00000485645 LOC101059948A0A1B0GTJ6 334 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 PRR19A6NJB7 356 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 TOX3O15405 576 aaPredicted RBP16.86■□□□□ 0.29
SMC4-216ENST00000485645 BRAFP15056 766 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 MAGEA1P43355 309 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 DRG2P55039 364 aaKnown RBP16.86■□□□□ 0.29
SMC4-216ENST00000485645 HADHBP55084 474 aaKnown RBP16.86■□□□□ 0.29
SMC4-216ENST00000485645 FOXM1Q08050 763 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 NOMO1Q15155 1222 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 TFDP3Q5H9I0 405 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 SIRPB2Q5JXA9 342 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 AGAP9Q5VTM2 703 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 ATG14Q6ZNE5 492 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 PID1Q7Z2X4 250 aa16.86■□□□□ 0.29
SMC4-216ENST00000485645 ZC3H18Q86VM9 953 aaKnown RBP16.86■□□□□ 0.29
SMC4-216ENST00000485645 RBM12BQ8IXT5 1001 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms