RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 SUZ12Q15022 739 aaKnown RBP20.14■□□□□ 0.81
PKD1-218ENST00000485120 BCL7AQ4VC05 210 aa20.14■□□□□ 0.81
PKD1-218ENST00000485120 KHDC1Q4VXA5 237 aaKnown RBP20.14■□□□□ 0.81
PKD1-218ENST00000485120 DOK6Q6PKX4 331 aa20.14■□□□□ 0.81
PKD1-218ENST00000485120 TRMT10CQ7L0Y3 403 aaKnown RBP20.14■□□□□ 0.81
PKD1-218ENST00000485120 LRRTM4Q86VH4 590 aa20.14■□□□□ 0.81
PKD1-218ENST00000485120 OTUD6BQ8N6M0 293 aa20.14■□□□□ 0.81
PKD1-218ENST00000485120 RASGEF1AQ8N9B8 481 aa20.14■□□□□ 0.81
PKD1-218ENST00000485120 CDKL2Q92772 493 aa20.14■□□□□ 0.81
PKD1-218ENST00000485120 LINC00615Q96LM1 132 aaPredicted RBP20.14■□□□□ 0.81
PKD1-218ENST00000485120 SMOC1Q9H4F8 434 aa20.14■□□□□ 0.81
PKD1-218ENST00000485120 CARS2Q9HA77 564 aaKnown RBP20.14■□□□□ 0.81
PKD1-218ENST00000485120 PARD6AQ9NPB6 346 aa20.14■□□□□ 0.81
PKD1-218ENST00000485120 MARCH4Q9P2E8 410 aaPredicted RBP20.14■□□□□ 0.81
PKD1-218ENST00000485120 TNRC6BQ9UPQ9 1833 aaKnown RBP20.13■□□□□ 0.81
PKD1-218ENST00000485120 NEMP2A6NFY4 417 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 PRMT5O14744 637 aaPredicted RBP20.13■□□□□ 0.81
PKD1-218ENST00000485120 PCDHGA12O60330 932 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 MTX2O75431 263 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 FUCA1P04066 466 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 PRSS56P0CW18 603 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 ERVK-10P10266 1014 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 CTSEP14091 401 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 RPS3P23396 243 aaKnown RBP eCLIP20.13■□□□□ 0.81
PKD1-218ENST00000485120 SSTR1P30872 391 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 CCT8P50990 548 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 CLCNKAP51800 687 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 GPX6P59796 221 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 B4GALNT1Q00973 533 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 ELOCQ15369 112 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 SF3A2Q15428 464 aaKnown RBP20.13■□□□□ 0.81
PKD1-218ENST00000485120 TEDDM1Q5T9Z0 273 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 ZNF470Q6ECI4 717 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 TCEAL6Q6IPX3 200 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 LVRNQ6Q4G3 990 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 MINDY1Q8N5J2 469 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 C2CD4AQ8NCU7 369 aaPredicted RBP20.13■□□□□ 0.81
PKD1-218ENST00000485120 TCEAL3Q969E4 200 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 PDXPQ96GD0 296 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 OR2M4Q96R27 311 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 GTPBP2Q9BX10 602 aaKnown RBP20.13■□□□□ 0.81
PKD1-218ENST00000485120 FUT8Q9BYC5 575 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 VPS37BQ9H9H4 285 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 ARFGAP3Q9NP61 516 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 PPANQ9NQ55 473 aaKnown RBP20.13■□□□□ 0.81
PKD1-218ENST00000485120 APOBEC3BQ9UH17 382 aaKnown RBP20.13■□□□□ 0.81
PKD1-218ENST00000485120 ZNHIT2Q9UHR6 403 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 KLF15Q9UIH9 416 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 MOSPD1Q9UJG1 213 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 FBXO5Q9UKT4 447 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 RAB21Q9UL25 225 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 PCDHB1Q9Y5F3 818 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 CEP192Q8TEP8 1941 aa20.13■□□□□ 0.81
PKD1-218ENST00000485120 SDK1Q7Z5N4 2213 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 LRRK1Q38SD2 2015 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 PLXNA2O75051 1894 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 C17orf113A0A1B0GUU1 675 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 TCRBV9S1A1TA0A576 114 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 GOLGA8KD6RF30 607 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 H3BMM5 538 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 GOLGA8TH3BQL2 631 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 PIAS2O75928 621 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 S1PR4O95977 384 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 OR56A5P0C7T3 313 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 GNPDA1P46926 289 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 LEPRP48357 1165 aaKnown RBP20.12■□□□□ 0.81
PKD1-218ENST00000485120 SEMA3AQ14563 771 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 KYNUQ16719 465 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 ZNF648Q5T619 568 aaPredicted RBP20.12■□□□□ 0.81
PKD1-218ENST00000485120 TRMT10BQ6PF06 316 aaKnown RBP20.12■□□□□ 0.81
PKD1-218ENST00000485120 TMEM220Q6QAJ8 160 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 RD3Q7Z3Z2 195 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 SLC26A11Q86WA9 606 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 DCLK2Q8N568 766 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 GPBAR1Q8TDU6 330 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 TIMM29Q9BSF4 260 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 PARD6BQ9BYG5 372 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 TXLNGYQ9BZA5 131 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 CLPBQ9H078 707 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 TMEM9BQ9NQ34 198 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 MRPL40Q9NQ50 206 aaKnown RBP20.12■□□□□ 0.81
PKD1-218ENST00000485120 IARS2Q9NSE4 1012 aaKnown RBP20.12■□□□□ 0.81
PKD1-218ENST00000485120 NINJ2Q9NZG7 142 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 PNMA8BQ9ULN7 279 aaPredicted RBP20.12■□□□□ 0.81
PKD1-218ENST00000485120 COMMD10Q9Y6G5 202 aa20.12■□□□□ 0.81
PKD1-218ENST00000485120 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.12■□□□□ 0.81
PKD1-218ENST00000485120 ESR1P03372 595 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 VCLP18206 1134 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 EPHA8P29322 1005 aaPredicted RBP20.11■□□□□ 0.81
PKD1-218ENST00000485120 PRLHRP49683 370 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 VSNL1P62760 191 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 ILF3Q12906 894 aaKnown RBP eCLIP20.11■□□□□ 0.81
PKD1-218ENST00000485120 NAB1Q13506 487 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 SHBQ15464 509 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 AASDHQ4L235 1098 aaPredicted RBP20.11■□□□□ 0.81
PKD1-218ENST00000485120 ZNF542PQ5EBM4 170 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 DBX2Q6ZNG2 339 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 MARK2Q7KZI7 788 aaKnown RBP20.11■□□□□ 0.81
PKD1-218ENST00000485120 TRAPPC5Q8IUR0 188 aa20.11■□□□□ 0.81
PKD1-218ENST00000485120 UNC5BQ8IZJ1 945 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms