RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PDCD2Q16342 344 aaPredicted RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 HNRNPA1L2Q32P51 320 aaKnown RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 NAIF1Q69YI7 327 aaPredicted RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 DPPA4Q7L190 304 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 PARS2Q7L3T8 475 aaKnown RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 HSD11B1LQ7Z5J1 315 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 SFTPA1Q8IWL2 248 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 OR8D1Q8WZ84 308 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 SPATA16Q9BXB7 569 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 RASSF4Q9H2L5 321 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 GOLGA8QA0A0J9YX86 632 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 GOLGA8OA6NCC3 632 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 TBC1D3BA6NDS4 549 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 PRR5-ARHGAP8B1AHC4 643 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 GOLGA8NF8WBI6 632 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 SIX3O95343 332 aaPredicted RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 NCF2P19878 526 aaPredicted RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 PTPN4P29074 926 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 GJA4P35212 333 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 OPRD1P41143 372 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 ARHGAP8P85298 464 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 ADAM15Q13444 863 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 ZNF234Q14588 700 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 FBXW10Q5XX13 1052 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 ERAP2Q6P179 960 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 ACAD11Q709F0 780 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 UCMAQ8WVF2 138 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 OR52B2Q96RD2 323 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 TSR3Q9UJK0 312 aaKnown RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 CDYLQ9Y232 598 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 E9PBE3 544 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 KLHL41O60662 606 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 RASSF9O75901 435 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 PSMC3P17980 439 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 MMP12P39900 470 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 RGS4P49798 205 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 DCDC1P59894 354 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 RALGDSQ12967 914 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 STON2Q8WXE9 905 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 PDLIM5Q96HC4 596 aaKnown RBP16.52■□□□□ 0.24
CTSA-207ENST00000484855 FAR2Q96K12 515 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 RAB3IPQ96QF0 476 aaPredicted RBP16.52■□□□□ 0.24
CTSA-207ENST00000484855 ABCG8Q9H221 673 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 WDR55Q9H6Y2 383 aaPredicted RBP16.52■□□□□ 0.24
CTSA-207ENST00000484855 CLEC1BQ9P126 229 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 FIS1Q9Y3D6 152 aa16.52■□□□□ 0.24
CTSA-207ENST00000484855 NCF1BA6NI72 391 aaPredicted RBP16.51■□□□□ 0.23
CTSA-207ENST00000484855 TRPC5OSA6NMA1 111 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 NCF1CA8MVU1 366 aaPredicted RBP16.51■□□□□ 0.23
CTSA-207ENST00000484855 JUNP05412 331 aaKnown RBP16.51■□□□□ 0.23
CTSA-207ENST00000484855 KRT16P08779 473 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 NCF1P14598 390 aaPredicted RBP16.51■□□□□ 0.23
CTSA-207ENST00000484855 EPHA3P29320 983 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 EEF1DP29692 281 aaKnown RBP16.51■□□□□ 0.23
CTSA-207ENST00000484855 ETV3P41162 512 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 C9orf64Q5T6V5 341 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 SERPINA13PQ6UXR4 307 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 GPSM1Q86YR5 675 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 TDHQ8IZJ6 230 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 KIRREL3Q8IZU9 778 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 ELSPBP1Q96BH3 223 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 FAM83DQ9H4H8 585 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 RAD18Q9NS91 495 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 TAGLN3Q9UI15 199 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 SARDHQ9UL12 918 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 LRRC14BA6NHZ5 514 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 ELFN1P0C7U0 828 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 TSPAN8P19075 237 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 AOC1P19801 751 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 CDH13P55290 713 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 B4GALNT1Q00973 533 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 ELAVL3Q14576 367 aaKnown RBP16.51■□□□□ 0.23
CTSA-207ENST00000484855 METTL21CQ5VZV1 264 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 PARM1Q6UWI2 310 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 Q6ZVL8 140 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 FRA10AC1Q70Z53 315 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 MYO1HQ8N1T3 1032 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 ZBTB2Q8N680 514 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 SCAMP4Q969E2 229 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 ASB2Q96Q27 587 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 PANX3Q96QZ0 392 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 TMEM245Q9H330 911 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 TNFRSF12AQ9NP84 129 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 TMCO1Q9UM00 188 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 STK38LQ9Y2H1 464 aa16.51■□□□□ 0.23
CTSA-207ENST00000484855 IGLV3-16A0A075B6K0 115 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 STX16-NPEPL1H3BU86 382 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 UBFD1O14562 309 aaKnown RBP16.5■□□□□ 0.23
CTSA-207ENST00000484855 STX16O14662 325 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 KLK8O60259 260 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 SNX2O60749 519 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 SKAP2O75563 359 aaPredicted RBP16.5■□□□□ 0.23
CTSA-207ENST00000484855 LAMP2P13473 410 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 DGKAP23743 735 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 ITGB7P26010 798 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 GDI1P31150 447 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 AKT1P31749 480 aa16.5■□□□□ 0.23
CTSA-207ENST00000484855 ELF3P78545 371 aaPredicted RBP16.5■□□□□ 0.23
CTSA-207ENST00000484855 LSM12Q3MHD2 195 aaKnown RBP16.5■□□□□ 0.23
CTSA-207ENST00000484855 GPRC6AQ5T6X5 926 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms