RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TXNRD2Q9NNW7 524 aa4.44□□□□□ -1.7
PTCD3-214ENST00000483925 TMEM74BQ9NUR3 256 aa4.44□□□□□ -1.7
PTCD3-214ENST00000483925 DNAJC11Q9NVH1 559 aa4.44□□□□□ -1.7
PTCD3-214ENST00000483925 ATAD3AQ9NVI7 634 aa4.44□□□□□ -1.7
PTCD3-214ENST00000483925 SPASTQ9UBP0 616 aa4.44□□□□□ -1.7
PTCD3-214ENST00000483925 GMEB2Q9UKD1 530 aa4.44□□□□□ -1.7
PTCD3-214ENST00000483925 LSM4Q9Y4Z0 139 aaKnown RBP4.44□□□□□ -1.7
PTCD3-214ENST00000483925 SIRT4Q9Y6E7 314 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-214ENST00000483925 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.44□□□□□ -1.7
PTCD3-214ENST00000483925 CLSPNQ9HAW4 1339 aa4.44□□□□□ -1.7
PTCD3-214ENST00000483925 POLR2AP24928 1970 aaKnown RBP4.44□□□□□ -1.7
PTCD3-214ENST00000483925 A0A0B4J293 547 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TCRBV7S3A2A0A539 114 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TYW5A2RUC4 315 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 CGB1A6NKQ9 187 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 FAM157AC9JC47 383 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 H0YCG3 227 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 H3BQ06 376 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 RNASET2O00584 256 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 PRYO14603 147 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 CASQ2O14958 399 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 PRAMEF11O60813 436 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 MED24O75448 989 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TJP3O95049 919 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 KCNK5O95279 499 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 SLC16A8O95907 504 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 FGBP02675 491 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 ELANEP08246 267 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 FAM86B2P0C5J1 330 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 RFPL3SP0C7P2 107 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TSPY4P0CV99 314 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TSPY10P0CW01 314 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TPBGLP0DKB5 382 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 PRG2P13727 222 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 GNAZP19086 355 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 DNASE1P24855 282 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 CD27P26842 260 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 RPA1P27694 616 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 APOBEC3AP31941 199 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 FRKP42685 505 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 VPS41P49754 854 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 ACTR1AP61163 376 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 RHAGQ02094 409 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 COX10Q12887 443 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 UGP2Q16851 508 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 PDCD4Q53EL6 469 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 KCNT1Q5JUK3 1230 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 RNASEH2BQ5TBB1 312 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TMEM198Q66K66 360 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 B3GNTL1Q67FW5 361 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 ANKRD16Q6P6B7 361 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 ZCCHC12Q6PEW1 402 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 AFTPHQ6ULP2 937 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 LCTLQ6UWM7 567 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TRIM72Q6ZMU5 477 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 Q6ZWC4 215 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 INTS8Q75QN2 995 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TRAPPC11Q7Z392 1133 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 GDF7Q7Z4P5 450 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 PHLDB2Q86SQ0 1253 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 RASAL3Q86YV0 1011 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 ARHGEF19Q8IW93 802 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 BATF2Q8N1L9 274 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 FAR1Q8WVX9 515 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 SLC5A11Q8WWX8 675 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 THRSPQ92748 146 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 MSI2Q96DH6 328 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 RRNAD1Q96FB5 475 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 ZC3HAV1LQ96H79 300 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 NAF1Q96HR8 494 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 SMC6Q96SB8 1091 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 THUMPD2Q9BTF0 503 aaKnown RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 KATNB1Q9BVA0 655 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 OSBPL8Q9BZF1 889 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 MINDY3Q9H8M7 445 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 SLC28A3Q9HAS3 691 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 RNPEPL1Q9HAU8 725 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 CHMP1AQ9HD42 196 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 FAM118AQ9NWS6 357 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TRPM5Q9NZQ8 1165 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 STK26Q9P289 416 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TRIM10Q9UDY6 481 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TNFSF13BQ9Y275 285 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 HEMK1Q9Y5R4 338 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-214ENST00000483925 TEX264Q9Y6I9 313 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 SPATA31A5Q5VU36 1347 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 SPATA31A6Q5VVP1 1343 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 SPATA31A7Q8IWB4 1347 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 ZNF541Q9H0D2 1346 aa4.43□□□□□ -1.7
PTCD3-214ENST00000483925 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.42□□□□□ -1.7
PTCD3-214ENST00000483925 GAGE12BA1L429 117 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 GAGE12HA6NDE8 117 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 WIPF3A6NGB9 483 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 SSX5O60225 188 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 GH2P01242 217 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 CYC1P08574 325 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 C8orf89P0DMQ9 161 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 AREGP15514 252 aa4.42□□□□□ -1.7
PTCD3-214ENST00000483925 NR2F2P24468 414 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms