RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 FUBP1Q96AE4 644 aaKnown RBP13.89□□□□□ -0.19
CLK3-204ENST00000483723 LINGO1Q96FE5 620 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 COPS8Q99627 209 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 ERVK-6Q9BXR3 956 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 GSTO2Q9H4Y5 243 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 COG4Q9H9E3 785 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 CYP4F12Q9HCS2 524 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 ACSS2Q9NR19 701 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 VTI1BQ9UEU0 232 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 TMCO1Q9UM00 188 aa13.89□□□□□ -0.19
CLK3-204ENST00000483723 APOBEC2Q9Y235 224 aaKnown RBP13.89□□□□□ -0.19
CLK3-204ENST00000483723 ANTXRLA6NF34 631 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 UBXN8O00124 270 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 FCHO1O14526 889 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 HGSO14964 777 aaPredicted RBP13.88□□□□□ -0.19
CLK3-204ENST00000483723 HDAC3O15379 428 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 CCDC22O60826 627 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 UNC5CO95185 931 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 SLC25A14O95258 325 aaPredicted RBP13.88□□□□□ -0.19
CLK3-204ENST00000483723 SERPINA6P08185 405 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 TNFRSF4P43489 277 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 METAP1P53582 386 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 ZBTB16Q05516 673 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 HTR4Q13639 388 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 TSNQ15631 228 aaKnown RBP13.88□□□□□ -0.19
CLK3-204ENST00000483723 TMEM52BQ4KMG9 183 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 CFAP157Q5JU67 520 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 FRMD7Q6ZUT3 714 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 NUDT18Q6ZVK8 323 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 CYP2U1Q7Z449 544 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 ALYREFQ86V81 257 aaKnown RBP13.88□□□□□ -0.19
CLK3-204ENST00000483723 SUGP1Q8IWZ8 645 aaKnown RBP13.88□□□□□ -0.19
CLK3-204ENST00000483723 MAPK15Q8TD08 544 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 PHF21BQ96EK2 531 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 COQ10AQ96MF6 247 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 ACOX2Q99424 681 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 TUBB6Q9BUF5 446 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 C1QTNF3Q9BXJ4 246 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 FBRSL1Q9HCM7 1045 aaKnown RBP13.88□□□□□ -0.19
CLK3-204ENST00000483723 SORCS3Q9UPU3 1222 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 PIKFYVEQ9Y2I7 2098 aa13.88□□□□□ -0.19
CLK3-204ENST00000483723 TMEM265A0A087WTH1 108 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 SYCE1LA8MT33 242 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 STX16-NPEPL1H3BU86 382 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 MYO1CO00159 1063 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 STX16O14662 325 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 NPC1O15118 1278 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 ETV3P41162 512 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 GALK1P51570 392 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 NAA20P61599 178 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 ELP6Q0PNE2 266 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 ADGRE1Q14246 886 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 GRIN2CQ14957 1233 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 E2F5Q15329 346 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 LRIT3Q3SXY7 679 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 EGFLAMQ63HQ2 1017 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 CYHR1Q6ZMK1 362 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 ASRGL1Q7L266 308 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 PTGR2Q8N8N7 351 aaPredicted RBP13.87□□□□□ -0.19
CLK3-204ENST00000483723 SCAMP4Q969E2 229 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 PRR11Q96HE9 360 aaPredicted RBP13.87□□□□□ -0.19
CLK3-204ENST00000483723 VPS35Q96QK1 796 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 ZSCAN5AQ9BUG6 496 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 SPATA16Q9BXB7 569 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 HDAC8Q9BY41 377 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 NMUR2Q9GZQ4 415 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 ABCG8Q9H221 673 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 TTYH1Q9H313 450 aaPredicted RBP13.87□□□□□ -0.19
CLK3-204ENST00000483723 EML4Q9HC35 981 aaKnown RBP13.87□□□□□ -0.19
CLK3-204ENST00000483723 SPATS2LQ9NUQ6 558 aaKnown RBP13.87□□□□□ -0.19
CLK3-204ENST00000483723 CD84Q9UIB8 345 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 RNF112Q9ULX5 631 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 LRRK1Q38SD2 2015 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 NPEPPSL1A6NEC2 478 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 CAPN14A8MX76 684 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 DGKAP23743 735 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 HK3P52790 923 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 GBX1Q14549 363 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 POM121L1PQ3SYA9 428 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 METTL21CQ5VZV1 264 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 RAB44Q7Z6P3 723 aaPredicted RBP13.87□□□□□ -0.19
CLK3-204ENST00000483723 DSG4Q86SJ6 1040 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 NLRP8Q86W28 1048 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 KIRREL3Q8IZU9 778 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 ZBTB2Q8N680 514 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 DDHD1Q8NEL9 900 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 PPP1R16AQ96I34 528 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 ASB2Q96Q27 587 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 PANX3Q96QZ0 392 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 RIOK2Q9BVS4 552 aaKnown RBP13.87□□□□□ -0.19
CLK3-204ENST00000483723 SARS2Q9NP81 518 aaKnown RBP13.87□□□□□ -0.19
CLK3-204ENST00000483723 TXLNGQ9NUQ3 528 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 STON1Q9Y6Q2 735 aa13.87□□□□□ -0.19
CLK3-204ENST00000483723 TICRRQ7Z2Z1 1910 aa13.86□□□□□ -0.19
CLK3-204ENST00000483723 CKAP5Q14008 2032 aa13.86□□□□□ -0.19
CLK3-204ENST00000483723 FADS2P1A8MWK0 482 aa13.86□□□□□ -0.19
CLK3-204ENST00000483723 C1QTNF3-AMACRE9PGA6 284 aa13.86□□□□□ -0.19
CLK3-204ENST00000483723 K7EQS6 105 aa13.86□□□□□ -0.19
CLK3-204ENST00000483723 EIF3FO00303 357 aaPredicted RBP13.86□□□□□ -0.19
CLK3-204ENST00000483723 BTN3A1O00481 513 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms