RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ADAM22Q9P0K1 906 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 KLHL42Q9P2K6 505 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 LRIT1Q9P2V4 623 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 LHX3Q9UBR4 397 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 IL17BQ9UHF5 180 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 MOSPD1Q9UJG1 213 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 TCFL5Q9UL49 500 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 PCDHA9Q9Y5H5 950 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 RNF215Q9Y6U7 377 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 COL6A6A6NMZ7 2263 aa5.88□□□□□ -1.47
CSDE1-207ENST00000483407 TRPM6Q9BX84 2022 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 TRBV23OR9-2A0A075B6M9 112 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PRAMEF33A0A0G2JMD5 474 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 TMEM202A6NGA9 273 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 ARHGAP42A6NI28 874 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 SIGLEC16A6NMB1 481 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 RHPN2P1A8MT19 583 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 B4DGG1 531 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 ALG1L2C9J202 215 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 STMND1H3BQB6 276 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CCP110O43303 1012 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PRAMEF10O60809 474 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PRAMEF11O60813 436 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PPFIA2O75334 1257 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PALMO75781 387 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 RECQL5O94762 991 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CPNE6O95741 557 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 HOXC4P09017 264 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 GSTM1P09488 218 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 ELFN1P0C7U0 828 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 UNGP13051 313 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CPEP16870 476 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PAMP19021 973 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 NFKBIAP25963 317 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 MMP12P39900 470 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CSNK1DP48730 415 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 NDST2P52849 883 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 TPI1P60174 286 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 POLR2LP62875 67 aaKnown RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 GUCY1A3Q02108 690 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 BCL2L1Q07817 233 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 ILF3Q12906 894 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 HLTFQ14527 1009 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CYTH1Q15438 398 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CLPPQ16740 277 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 DPCR1Q3MIW9 517 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 TCP11X2Q5H9J9 407 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 SPECC1LQ69YQ0 1117 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 DNAJC24Q6P3W2 148 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 DCUN1D2Q6PH85 259 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 VASH2Q86V25 355 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PIM3Q86V86 326 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 ZFAND4Q86XD8 727 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PHF13Q86YI8 300 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CAMK1DQ8IU85 385 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PYROXD2Q8N2H3 581 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CCDC112Q8NEF3 446 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 OR1E3Q8WZA6 343 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 UBE2FQ969M7 185 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 FUBP1Q96AE4 644 aaKnown RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 SEMA3CQ99985 751 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CINPQ9BW66 212 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 GSDMCQ9BYG8 508 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 TRIM4Q9C037 500 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 KLC2Q9H0B6 622 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 TMEM168Q9H0V1 697 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 CLSTN2Q9H4D0 955 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 FGF22Q9HCT0 170 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 NLRC4Q9NPP4 1024 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 PHPT1Q9NRX4 125 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 FAM207AQ9NSI2 230 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 SAMSN1Q9NSI8 373 aaKnown RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 SEPT11Q9NVA2 429 aaKnown RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 KCTD5Q9NXV2 234 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 TAB2Q9NYJ8 693 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 FOXJ2Q9P0K8 574 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 FZD10Q9ULW2 581 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 ANKRD17O75179 2603 aaKnown RBP5.87□□□□□ -1.47
CSDE1-207ENST00000483407 ATMQ13315 3056 aa5.87□□□□□ -1.47
CSDE1-207ENST00000483407 DOCK9Q9BZ29 2069 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 A0A1W2PQ67 120 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PRSS38A1L453 326 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 EIF3CLB5ME19 914 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 H3BS24 57 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 J3KR12 359 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 EEF2KO00418 725 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 HGSO14964 777 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 TEX33O43247 280 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 DAPK3O43293 454 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 SUV39H1O43463 412 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 BUB1BO60566 1050 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PRKCGP05129 697 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 CCDC172P0C7W6 258 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 CCNB1P14635 433 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 CHRNB2P17787 502 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ITGB6P18564 788 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ENDOUP21128 410 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms