RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 SFRP1Q8N474 314 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 BLOC1S5Q8TDH9 187 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 IGSF8Q969P0 613 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 HERC2P3Q9BVR0 1158 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 MID1IP1Q9NPA3 183 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 AKIP1Q9NQ31 210 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 CMTM6Q9NX76 183 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 GMIPQ9P107 970 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 GIMAP2Q9UG22 337 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 TTC3P53804 2025 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 NLRC5Q86WI3 1866 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 PTPRDP23468 1912 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 LRRC14BA6NHZ5 514 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 H0Y858 1186 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 TNPO2O14787 897 aaKnown RBP17.91■□□□□ 0.46
SSR4-209ENST00000482902 LSM1O15116 133 aaKnown RBP17.91■□□□□ 0.46
SSR4-209ENST00000482902 CDK14O94921 469 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 GPIP06744 558 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 FCGR1AP12314 374 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 PLA2G16P53816 162 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 IFITM3Q01628 133 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 BROXQ5VW32 411 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 FBXL22Q6P050 247 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 FKBP10Q96AY3 582 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 TADA1Q96BN2 335 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 CTRCQ99895 268 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 BEGAINQ9BUH8 593 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 TLR9Q9NR96 1032 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.91■□□□□ 0.46
SSR4-209ENST00000482902 SUN2Q9UH99 717 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 ARL5AQ9Y689 179 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 DGKBQ9Y6T7 804 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 PATJQ8NI35 1801 aa17.91■□□□□ 0.46
SSR4-209ENST00000482902 UBXN8O00124 270 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 CD3EAPO15446 510 aaKnown RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 TBX18O95935 607 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 SHMT2P34897 504 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 TIAL1Q01085 375 aaKnown RBP eCLIP17.9■□□□□ 0.46
SSR4-209ENST00000482902 CBX2Q14781 532 aaPredicted RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 OR4D1Q15615 310 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 C6orf183Q5T699 404 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 RAP1GAP2Q684P5 730 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 PIWIL3Q7Z3Z3 882 aaKnown RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 RAB44Q7Z6P3 723 aaPredicted RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 CIR1Q86X95 450 aaPredicted RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 PARP8Q8N3A8 854 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 MINDY2Q8NBR6 621 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 TWIST2Q8WVJ9 160 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 SEMA3CQ99985 751 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 HOPXQ9BPY8 73 aaPredicted RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 SYT17Q9BSW7 474 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 KLHL25Q9H0H3 589 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 ZNF639Q9UID6 485 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 ZFC3H1O60293 1989 aaKnown RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 BBIP1A8MTZ0 92 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 PIP5K1BO14986 540 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 ABCB7O75027 752 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 IGHA2P01877 340 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 UGT2B4P06133 528 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 ALOX5P09917 674 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 TGM1P22735 817 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 EEF1DP29692 281 aaKnown RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 GRK4P32298 578 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 RCVRNP35243 200 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 FOXA1P55317 472 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 SEMA3AQ14563 771 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 POLD3Q15054 466 aaPredicted RBP17.9■□□□□ 0.46
SSR4-209ENST00000482902 PFKFB4Q16877 469 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 PRMT9Q6P2P2 845 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 SLC16A12Q6ZSM3 486 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 ATP6V0D2Q8N8Y2 350 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 NRBF2Q96F24 287 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 MUS81Q96NY9 551 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 HMG20AQ9NP66 347 aa17.9■□□□□ 0.46
SSR4-209ENST00000482902 MIA3Q5JRA6 1907 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 AZIN1O14977 448 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 RAMP2O60895 175 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 RAD23AP54725 363 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 ACVR1Q04771 509 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 CAPRIN1Q14444 709 aaKnown RBP17.89■□□□□ 0.45
SSR4-209ENST00000482902 GRB7Q14451 532 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 VPS26BQ4G0F5 336 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 MRNIPQ6NTE8 343 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 TBPL2Q6SJ96 375 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 MIB1Q86YT6 1006 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 SNX29P2Q8IUI4 249 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 MINDY1Q8N5J2 469 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 SGCDQ92629 289 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 NSUN5Q96P11 429 aaKnown RBP17.89■□□□□ 0.45
SSR4-209ENST00000482902 ASB2Q96Q27 587 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 FBXO44Q9H4M3 255 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 INTS10Q9NVR2 710 aaKnown RBP17.89■□□□□ 0.45
SSR4-209ENST00000482902 VPS51Q9UID3 782 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 TRPM7Q96QT4 1865 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 IGLV3-10A0A075B6K4 115 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 TCRBV5S2A0A599 114 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 H0YAE9 185 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 B4GALT3O60512 393 aa17.89■□□□□ 0.45
SSR4-209ENST00000482902 BCAS1O75363 584 aaPredicted RBP17.89■□□□□ 0.45
SSR4-209ENST00000482902 FGF4P08620 206 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms