RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PDXDC1Q6P996 788 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 DENND5BQ6ZUT9 1274 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 ZNF534Q76KX8 674 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 ARMC9Q7Z3E5 817 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 GPR180Q86V85 440 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 TMEM219Q86XT9 240 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 ZDHHC17Q8IUH5 632 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 ADHFE1Q8IWW8 467 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 PM20D2Q8IYS1 436 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 TMTC2Q8N394 836 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 MINDY1Q8N5J2 469 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 GCSAMQ8N6F7 178 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 PIGTQ969N2 578 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 MOAP1Q96BY2 351 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 TMEM19Q96HH6 336 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 QRFPRQ96P65 431 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 DDOQ99489 341 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 KLHL4Q9C0H6 718 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 CSTL1Q9H114 145 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 PSD3Q9NYI0 1048 aa5.57□□□□□ -1.52
SF3B1-210ENST00000482158 WBP11Q9Y2W2 641 aaKnown RBP5.57□□□□□ -1.52
SF3B1-210ENST00000482158 LILRA5A6NI73 299 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 LDB3O75112 727 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 CREG1O75629 220 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 CAMTA2O94983 1202 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 SNHG28P0DPA3 235 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 KCNA5P22460 613 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 NMBRP28336 390 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 ZXDBP98169 803 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 C15orf59Q2T9L4 293 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-210ENST00000482158 GPR139Q6DWJ6 353 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 RPUSD3Q6P087 351 aaKnown RBP5.56□□□□□ -1.52
SF3B1-210ENST00000482158 CREB3L2Q70SY1 520 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 KRT74Q7RTS7 529 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 ADIPOR2Q86V24 386 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 GALNT13Q8IUC8 556 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 ZNF441Q8N8Z8 693 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 SYT2Q8N9I0 419 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-210ENST00000482158 UTP15Q8TED0 518 aaKnown RBP5.56□□□□□ -1.52
SF3B1-210ENST00000482158 ZNF622Q969S3 477 aaKnown RBP eCLIP5.56□□□□□ -1.522e-16■□□□□ 9.4
SF3B1-210ENST00000482158 SLC22A12Q96S37 553 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 HGH1Q9BTY7 390 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 TXLNGYQ9BZA5 131 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 RTN4RQ9BZR6 473 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 RAD21L1Q9H4I0 556 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 MARCH4Q9P2E8 410 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-210ENST00000482158 KLHL9Q9P2J3 617 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 ZNF148Q9UQR1 794 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 AMDHD2Q9Y303 409 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 PCDHGA5Q9Y5G8 931 aa5.56□□□□□ -1.52
SF3B1-210ENST00000482158 GPR75-ASB3A0A0A6YYF3 556 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 C4orf47A7E2U8 309 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 TMEM189-UBE2V1I3L0A0 370 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 SLC28A2O43868 658 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 HSP90AA1P07900 732 aaKnown RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 ITGA2P17301 1181 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 ISL1P61371 349 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 COG7P83436 770 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 RELQ04864 619 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 UBE2V1Q13404 147 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 MEP1AQ16819 746 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 NAA16Q6N069 864 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 TMCO3Q6UWJ1 677 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 RAD9BQ6WBX8 426 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 C16orf82Q7Z2V1 217 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 LDB1Q86U70 411 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 TMPRSS12Q86WS5 348 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 MAP7D3Q8IWC1 876 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 RNF113BQ8IZP6 322 aaKnown RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 SLC38A5Q8WUX1 472 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 ADGRG7Q96K78 797 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 MARK4Q96L34 752 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 ZNF385AQ96PM9 386 aaKnown RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 CDRT15Q96T59 188 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 MRPL1Q9BYD6 325 aaKnown RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 HIPK2Q9H2X6 1198 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 SLCO5A1Q9H2Y9 848 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 KCNK15Q9H427 330 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 CD93Q9NPY3 652 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 LARSQ9P2J5 1176 aaKnown RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 CRNNQ9UBG3 495 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-210ENST00000482158 HACL1Q9UJ83 578 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 OR2W1Q9Y3N9 320 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 PCDHAC2Q9Y5I4 1007 aa5.55□□□□□ -1.52
SF3B1-210ENST00000482158 ASTN2O75129 1339 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-210ENST00000482158 A0A0G2JPF8 293 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 SYNDIG1LA6NDD5 238 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 LACTBL1A8MY62 500 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 HNRNPCL3B7ZW38 293 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 UBE2CO00762 179 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 PAPSS2O95340 614 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-210ENST00000482158 HNRNPCL4P0DMR1 293 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 SNTA1Q13424 505 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 FHL1Q13642 323 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 FAM98BQ52LJ0 330 aaKnown RBP5.54□□□□□ -1.52
SF3B1-210ENST00000482158 ADALQ6DHV7 355 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 INTS8Q75QN2 995 aaKnown RBP5.54□□□□□ -1.52
SF3B1-210ENST00000482158 GUF1Q8N442 669 aaKnown RBP5.54□□□□□ -1.52
SF3B1-210ENST00000482158 KCTD6Q8NC69 237 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms