RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 STAT4Q14765 748 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 SMAD1Q15797 465 aaKnown RBP11.49□□□□□ -0.57
HPS4-212ENST00000481910 ATP13A5Q4VNC0 1218 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 WDR45BQ5MNZ6 344 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 PMS2CLQ68D20 193 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 TLDC1Q6P9B6 456 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 AFTPHQ6ULP2 937 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 PRR23BQ6ZRT6 265 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UNC5BQ8IZJ1 945 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 PELI3Q8N2H9 469 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 TRAM1L1Q8N609 369 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 DENND6BQ8NEG7 585 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 OR4L1Q8NH43 312 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 GSDMBQ8TAX9 411 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 DTX3LQ8TDB6 740 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 ZC3H10Q96K80 434 aaKnown RBP11.49□□□□□ -0.57
HPS4-212ENST00000481910 FAM96AQ9H5X1 160 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A7Q9HAW7 530 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A10Q9HAW8 530 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 UGT1A8Q9HAW9 530 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 PLAC1Q9HBJ0 212 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 C20orf96Q9NUD7 363 aaPredicted RBP11.49□□□□□ -0.57
HPS4-212ENST00000481910 CA5BQ9Y2D0 317 aa11.49□□□□□ -0.57
HPS4-212ENST00000481910 ENO4A6NNW6 628 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 FADS2P1A8MWK0 482 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 GPR39O43194 453 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 TROVE2P10155 538 aaKnown RBP eCLIP11.48□□□□□ -0.57
HPS4-212ENST00000481910 TSHRP16473 764 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 ITGALP20701 1170 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 S100A5P33763 92 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 ARCN1P48444 511 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 CLDN2P57739 230 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 GPX6P59796 221 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 CACNG1Q06432 222 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 NFATC2Q13469 925 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 THOC5Q13769 683 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 MYBPC3Q14896 1274 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 FASTKD1Q53R41 847 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 LYSMD4Q5XG99 296 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 STEAP4Q687X5 459 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 THOC7Q6I9Y2 204 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 EMBQ6PCB8 327 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 ZC3H14Q6PJT7 736 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 TAS2R42Q7RTR8 314 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 SNX20Q7Z614 316 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 AENQ8WTP8 325 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 CERS2Q96G23 380 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 TTC25Q96NG3 672 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 ORAI3Q9BRQ5 295 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 ZNF106Q9H2Y7 1883 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 AASDHPPTQ9NRN7 309 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 NINJ2Q9NZG7 142 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 CORO1CQ9ULV4 474 aaPredicted RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 PRELID1Q9Y255 219 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 HS3ST3A1Q9Y663 406 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 R4GN57 208 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 POM121BA6NF01 834 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 H0Y8X5 98 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 INPP4BO15327 924 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 CD3EAPO15446 510 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 SPAG6O75602 509 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 SLC25A14O95258 325 aaPredicted RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 ACSL3O95573 720 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 SOD1P00441 154 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 GSTA2P09210 222 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 ERVK-10P10266 1014 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 ITPKAP23677 461 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 IGFALSP35858 605 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 CDKN1CP49918 316 aaPredicted RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 INAQ16352 499 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 GPR33Q49SQ1 333 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 HSP90AA5PQ58FG0 334 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 PDPK2PQ6A1A2 396 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 NEPROQ6NW34 567 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 TRMT10BQ6PF06 316 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 KDM7AQ6ZMT4 941 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 TRMT10CQ7L0Y3 403 aaKnown RBP11.48□□□□□ -0.57
HPS4-212ENST00000481910 KCNMB4Q86W47 210 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 TMEM145Q8NBT3 493 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 GDAP1Q8TB36 358 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 DNASE2BQ8WZ79 361 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 BMFQ96LC9 184 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 TXLNGYQ9BZA5 131 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 CATSPERZQ9NTU4 200 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 IL20Q9NYY1 176 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 MOCS1Q9NZB8 636 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 CRLS1Q9UJA2 301 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 CARD8Q9Y2G2 431 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 OR1A2Q9Y585 309 aa11.48□□□□□ -0.57
HPS4-212ENST00000481910 hCG_2014768A0A024R1R8 64 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 TCRBV9S1A1TA0A576 114 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 PRSS56P0CW18 603 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 FOXN2P32314 431 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 PHBP35232 272 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 TRIM23P36406 574 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 RACK1P63244 317 aaKnown RBP11.47□□□□□ -0.57
HPS4-212ENST00000481910 MRNIPQ6NTE8 343 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 PSAPL1Q6NUJ1 521 aa11.47□□□□□ -0.57
HPS4-212ENST00000481910 GALNT15Q8N3T1 639 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms