RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 PSPC1Q8WXF1 523 aaKnown RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 INTS12Q96CB8 462 aaKnown RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 KXD1Q9BQD3 176 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 C1QTNF4Q9BXJ3 329 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 IFIH1Q9BYX4 1025 aaKnown RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 RETREG1Q9H6L5 497 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 ESRP2Q9H6T0 727 aaKnown RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 MKKSQ9NPJ1 570 aaPredicted RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 GPR108Q9NPR9 543 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 OLA1Q9NTK5 396 aaKnown RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 ORC3Q9UBD5 711 aaPredicted RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 MALT1Q9UDY8 824 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 LIMA1Q9UHB6 759 aaKnown RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 ICAM5Q9UMF0 924 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 CAPN7Q9Y6W3 813 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 NOTCH1P46531 2555 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 ATXN2Q99700 1313 aaKnown RBP3.67□□□□□ -1.82
COPA-204ENST00000481522 NBEAL1Q6ZS30 2694 aa3.67□□□□□ -1.82
COPA-204ENST00000481522 KIAA0232Q92628 1395 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 IGSF10Q6WRI0 2623 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 TRIOO75962 3097 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 WDFY3Q8IZQ1 3526 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 A0A1W2PRG0 241 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 hDV102S1A0JD36 115 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 TGFB1I1O43294 461 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 PPP1R3DO95685 299 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 IGHV4-30-4P0DP06 118 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 TNFAIP3P21580 790 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 CHMP24386 653 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 PSMA4P25789 261 aaKnown RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 PIP4K2AP48426 406 aaPredicted RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 TMEM115Q12893 351 aaPredicted RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 OLIG2Q13516 323 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 EFNB3Q15768 340 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 COL28A1Q2UY09 1125 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 USP41Q3LFD5 358 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 FAM69BQ5VUD6 431 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 METTL2BQ6P1Q9 378 aaKnown RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 RHBDF2Q6PJF5 856 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 GSG1LQ6UXU4 331 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 B3GNT6Q6ZMB0 384 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 QSOX2Q6ZRP7 698 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 WDR63Q8IWG1 891 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 PPHLN1Q8NEY8 458 aaKnown RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 LILRB1Q8NHL6 650 aaPredicted RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 KCNG4Q8TDN1 519 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 HDAC2Q92769 488 aaKnown RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 METTL2AQ96IZ6 378 aaKnown RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 SLC41A2Q96JW4 573 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 FAM110AQ9BQ89 295 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 HAUS8Q9BT25 410 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 STRA6Q9BX79 667 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 KIF9Q9HAQ2 790 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 FBRSL1Q9HCM7 1045 aaKnown RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 DIAPH3Q9NSV4 1193 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 DLGAP2Q9P1A6 1054 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 SLC9A2Q9UBY0 812 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 AASSQ9UDR5 926 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 SLCO3A1Q9UIG8 710 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 ADAMTS13Q76LX8 1427 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 INO80Q9ULG1 1556 aaPredicted RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 DSPP15924 2871 aaKnown RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 TRPM1Q7Z4N2 1603 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 EIF2AK4Q9P2K8 1649 aaKnown RBP3.66□□□□□ -1.82
COPA-204ENST00000481522 NF1P21359 2839 aa3.66□□□□□ -1.82
COPA-204ENST00000481522 SLIT3O75094 1523 aa3.65□□□□□ -1.82
COPA-204ENST00000481522 ITPR1Q14643 2758 aa3.65□□□□□ -1.82
COPA-204ENST00000481522 ATRQ13535 2644 aa3.65□□□□□ -1.82
COPA-204ENST00000481522 ANKRD26Q9UPS8 1709 aa3.65□□□□□ -1.82
COPA-204ENST00000481522 KIAA1107Q9UPP5 1409 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 A0A087X0M5 115 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 A0A1B0GX30 115 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 CPED1A4D0V7 1026 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 PRR23AA6NEV1 266 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 AKR1B15C9JRZ8 316 aaPredicted RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 SH3BP5O60239 455 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 PAGE4O60829 102 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 LDB3O75112 727 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 NDUFS7O75251 213 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 GAS8-AS1O95177 125 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 CYC1P08574 325 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 SNRNP70P08621 437 aaKnown RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 ZNF182P17025 639 aaPredicted RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 MAOAP21397 527 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 EIF2S3P41091 472 aaKnown RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 RGS2P41220 211 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 METAP2P50579 478 aaKnown RBP eCLIP3.65□□□□□ -1.83
COPA-204ENST00000481522 RPS3AP61247 264 aaKnown RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 POU3F1Q03052 451 aaPredicted RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 EEF1A2Q05639 463 aaKnown RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 GRSF1Q12849 480 aaKnown RBP eCLIP3.65□□□□□ -1.83
COPA-204ENST00000481522 FRG1Q14331 258 aaKnown RBP3.65□□□□□ -1.83
COPA-204ENST00000481522 SF3B4Q15427 424 aaKnown RBP eCLIP3.65□□□□□ -1.83
COPA-204ENST00000481522 C2orf68Q2NKX9 166 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 AMZ1Q400G9 498 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 SLC45A4Q5BKX6 768 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 GGNBP1Q5YKI7 109 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 PLEKHA7Q6IQ23 1121 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 ANKRD54Q6NXT1 300 aa3.65□□□□□ -1.83
COPA-204ENST00000481522 TAOK1Q7L7X3 1001 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms