RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZC3H18Q86VM9 953 aaKnown RBP15.02■□□□□ -0
LIMS3-203ENST00000480744 PLXDC1Q8IUK5 500 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 TRAPPC5Q8IUR0 188 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 NLGN4XQ8N0W4 816 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 SLC25A41Q8N5S1 370 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 NLGN4YQ8NFZ3 816 aaPredicted RBP15.02■□□□□ -0
LIMS3-203ENST00000480744 KIAA1143Q96AT1 154 aaPredicted RBP15.02■□□□□ -0
LIMS3-203ENST00000480744 HAUS1Q96CS2 278 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 RNF31Q96EP0 1072 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 SRPK1Q96SB4 655 aaKnown RBP15.02■□□□□ -0
LIMS3-203ENST00000480744 TRIM4Q9C037 500 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 GOLPH3Q9H4A6 298 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 EPB41L1Q9H4G0 881 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 GPN2Q9H9Y4 310 aaPredicted RBP15.02■□□□□ -0
LIMS3-203ENST00000480744 KLHL8Q9P2G9 620 aaPredicted RBP15.02■□□□□ -0
LIMS3-203ENST00000480744 TRIM10Q9UDY6 481 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 FAM153AQ9UHL3 310 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 PILRAQ9UKJ1 303 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 INTUQ9ULD6 942 aa15.02■□□□□ -0
LIMS3-203ENST00000480744 BOD1L1Q8NFC6 3051 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 FLNBO75369 2602 aaKnown RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 MN1Q10571 1320 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 ZNF891A8MT65 544 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 AKR1B15C9JRZ8 316 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 POLR1CO15160 346 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 PSTPIP1O43586 416 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 VEGFDO43915 354 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 AMD1P17707 334 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 XRCC1P18887 633 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 RPL10P27635 214 aaKnown RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 CD68P34810 354 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 SLC19A1P41440 591 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 DRG2P55039 364 aaKnown RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 WNT3AP56704 352 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 FOXM1Q08050 763 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 ATP13A5Q4VNC0 1218 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 KHDC1Q4VXA5 237 aaKnown RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 BORAQ6PGQ7 559 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 CCDC50Q8IVM0 306 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 UNC5BQ8IZJ1 945 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 P3H4Q92791 437 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 TTC25Q96NG3 672 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 TGM7Q96PF1 710 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 ZPBPQ9BS86 351 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 TIMM29Q9BSF4 260 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 FBXO8Q9NRD0 319 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 STARD5Q9NSY2 213 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 ZNF624Q9P2J8 865 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 MYO18BQ8IUG5 2567 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 TLN1Q9Y490 2541 aaKnown RBP15.01□□□□□ -0.01
LIMS3-203ENST00000480744 SPTA1P02549 2419 aa15.01□□□□□ -0.01
LIMS3-203ENST00000480744 OR52A4PA6NMU1 304 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 PPFIA2O75334 1257 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 STK17BO94768 372 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 UBXN7O94888 489 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 PRKAR1AP10644 381 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 VCLP18206 1134 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 ITGB6P18564 788 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 IDSP22304 550 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 MAP4P27816 1152 aaKnown RBP15□□□□□ -0.01
LIMS3-203ENST00000480744 MAGEA1P43355 309 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 CHRNA4P43681 627 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 SEPHS1P49903 392 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 WASHC5Q12768 1159 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 TCEAL1Q15170 157 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 SIRPB2Q5JXA9 342 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 KDELC1Q6UW63 502 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 PID1Q7Z2X4 250 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 ZNF547Q8IVP9 402 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 IPMKQ8NFU5 416 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 BLOC1S5Q8TDH9 187 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 CXorf40BQ96DE9 158 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 VPS35Q96QK1 796 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 CLMPQ9H6B4 373 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 UCK1Q9HA47 277 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 OGFRQ9NZT2 677 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 TMPRSS11EQ9UL52 423 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 ALG6Q9Y672 507 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 SLC30A1Q9Y6M5 507 aa15□□□□□ -0.01
LIMS3-203ENST00000480744 ASH1LQ9NR48 2969 aaKnown RBP14.99□□□□□ -0.01
LIMS3-203ENST00000480744 LOC101059948A0A1B0GTJ6 334 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 CAPN5O15484 640 aaPredicted RBP14.99□□□□□ -0.01
LIMS3-203ENST00000480744 NKX2-8O15522 239 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 MTSS1O43312 755 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 BUD23O43709 281 aaKnown RBP14.99□□□□□ -0.01
LIMS3-203ENST00000480744 RASSF9O75901 435 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 HMGCLP35914 325 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 SPAM1P38567 509 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 LEPRP48357 1165 aaKnown RBP14.99□□□□□ -0.01
LIMS3-203ENST00000480744 MARCKSL1P49006 195 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 KCNC4Q03721 635 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 ADCY2Q08462 1091 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 TMEM115Q12893 351 aaPredicted RBP14.99□□□□□ -0.01
LIMS3-203ENST00000480744 PPP2R5EQ16537 467 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 TAZQ16635 292 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 TFDP3Q5H9I0 405 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 FAM151BQ6UXP7 276 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 TIPARPQ7Z3E1 657 aaKnown RBP14.99□□□□□ -0.01
LIMS3-203ENST00000480744 GLT6D1Q7Z4J2 308 aa14.99□□□□□ -0.01
LIMS3-203ENST00000480744 ZNF567Q8N184 647 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms