RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CARD6Q9BX69 1037 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 PHACTR1Q9C0D0 580 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 SLC32A1Q9H598 525 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 FAM96AQ9H5X1 160 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 ZNHIT2Q9UHR6 403 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 GPSM3Q9Y4H4 160 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 PCYT1BQ9Y5K3 369 aaPredicted RBP19.49■□□□□ 0.71
LIME1-205ENST00000480139 MAD1L1Q9Y6D9 718 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 RPS6KL1Q9Y6S9 549 aa19.49■□□□□ 0.71
LIME1-205ENST00000480139 ZFC3H1O60293 1989 aaKnown RBP19.49■□□□□ 0.71
LIME1-205ENST00000480139 ARID1BQ8NFD5 2236 aaPredicted RBP19.49■□□□□ 0.71
LIME1-205ENST00000480139 ZCWPW2A0A1B0GU75 182 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 CFAP99D6REC4 459 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 E7ESA3 106 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 KMOO15229 486 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 YY2O15391 372 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 TTC4O95801 387 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 POLBP06746 335 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 ANXA6P08133 673 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 CELA2BP08218 269 aaPredicted RBP19.48■□□□□ 0.71
LIME1-205ENST00000480139 PGAM1P18669 254 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 AKT1P31749 480 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 PPARGP37231 505 aaPredicted RBP19.48■□□□□ 0.71
LIME1-205ENST00000480139 ARCN1P48444 511 aaKnown RBP19.48■□□□□ 0.71
LIME1-205ENST00000480139 CDKN1CP49918 316 aaPredicted RBP19.48■□□□□ 0.71
LIME1-205ENST00000480139 B4GALNT1Q00973 533 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 CTBSQ01459 385 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 FASTKD1Q53R41 847 aaKnown RBP19.48■□□□□ 0.71
LIME1-205ENST00000480139 ZCCHC8Q6NZY4 707 aaKnown RBP19.48■□□□□ 0.71
LIME1-205ENST00000480139 PACS1Q6VY07 963 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 TAS2R42Q7RTR8 314 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 NRROSQ86YC3 692 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 ZNF547Q8IVP9 402 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 EID2Q8N6I1 236 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 RASGEF1AQ8N9B8 481 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 FAM181AQ8N9Y4 354 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 ZNF669Q96BR6 464 aaPredicted RBP19.48■□□□□ 0.71
LIME1-205ENST00000480139 DCUN1D1Q96GG9 259 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 TTC1Q99614 292 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 CDC6Q99741 560 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 TIMM29Q9BSF4 260 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 CATSPERZQ9NTU4 200 aa19.48■□□□□ 0.71
LIME1-205ENST00000480139 DNMT3AQ9Y6K1 912 aaPredicted RBP19.48■□□□□ 0.71
LIME1-205ENST00000480139 KLHL33A6NCF5 533 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 TRIM38O00635 465 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 FFAR2O15552 330 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 VAPBO95292 243 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 PRSS56P0CW18 603 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 CLCNKAP51800 687 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 SLC7A5Q01650 507 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 PUM1Q14671 1186 aaKnown RBP eCLIP19.47■□□□□ 0.71
LIME1-205ENST00000480139 DBN1Q16643 649 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 BBS9Q3SYG4 887 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 BCL7AQ4VC05 210 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 DNTTIP2Q5QJE6 756 aaKnown RBP19.47■□□□□ 0.71
LIME1-205ENST00000480139 C6orf132Q5T0Z8 1188 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 CES3Q6UWW8 571 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 TAF8Q7Z7C8 310 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 C11orf96Q7Z7L8 435 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 GLRX5Q86SX6 157 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 GPR150Q8NGU9 434 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 FCRL3Q96P31 734 aaPredicted RBP19.47■□□□□ 0.71
LIME1-205ENST00000480139 BOCQ9BWV1 1114 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 FAM129AQ9BZQ8 928 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 NCKIPSDQ9NZQ3 722 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 DOLKQ9UPQ8 538 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 ST14Q9Y5Y6 855 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 TEX264Q9Y6I9 313 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 FAM169AQ9Y6X4 670 aa19.47■□□□□ 0.71
LIME1-205ENST00000480139 EIF3HO15372 352 aaKnown RBP eCLIP19.46■□□□□ 0.71
LIME1-205ENST00000480139 CD3EAPO15446 510 aaKnown RBP19.46■□□□□ 0.71
LIME1-205ENST00000480139 SIGLEC6O43699 453 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 KCNJ13O60928 360 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 CEACAM1P13688 526 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 ATP1B2P14415 290 aaPredicted RBP19.46■□□□□ 0.71
LIME1-205ENST00000480139 NSG1P42857 185 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 TTPAP49638 278 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 CTSCP53634 463 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 DEFB133Q30KQ1 61 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 PROX2Q3B8N5 592 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 SPANXN3Q5MJ09 141 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 MICALCLQ6ZW33 695 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 CENPUQ71F23 418 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 CHST15Q7LFX5 561 aaPredicted RBP19.46■□□□□ 0.71
LIME1-205ENST00000480139 TRAPPC5Q8IUR0 188 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.46■□□□□ 0.71
LIME1-205ENST00000480139 CCL4L1Q8NHW4 92 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 LINC00615Q96LM1 132 aaPredicted RBP19.46■□□□□ 0.71
LIME1-205ENST00000480139 PWWP2AQ96N64 755 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 CAMK1GQ96NX5 476 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 TRIM56Q9BRZ2 755 aaKnown RBP19.46■□□□□ 0.71
LIME1-205ENST00000480139 FOXP3Q9BZS1 431 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 FAM114A2Q9NRY5 505 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 FTSJ1Q9UET6 329 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 PRKAB1Q9Y478 270 aa19.46■□□□□ 0.71
LIME1-205ENST00000480139 PRR19A6NJB7 356 aa19.45■□□□□ 0.7
LIME1-205ENST00000480139 QSOX1O00391 747 aa19.45■□□□□ 0.7
LIME1-205ENST00000480139 SGTAO43765 313 aa19.45■□□□□ 0.7
LIME1-205ENST00000480139 BANF1O75531 89 aa19.45■□□□□ 0.7
LIME1-205ENST00000480139 AP2A2O94973 939 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms