RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GUSBP11Q6P575 273 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 DHRS13Q6UX07 377 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 CERS6Q6ZMG9 384 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 MARK2Q7KZI7 788 aaKnown RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 CHST15Q7LFX5 561 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 EFL1Q7Z2Z2 1120 aaKnown RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 C11orf96Q7Z7L8 435 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 NAGSQ8N159 534 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 SFRP1Q8N474 314 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 KYQ8NBH2 561 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 DNAJC1Q96KC8 554 aaKnown RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 GULP1Q9UBP9 304 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 TCAF1Q9Y4C2 921 aa15.26■□□□□ 0.03
C9orf3-217ENST00000479161 PCYT1BQ9Y5K3 369 aaPredicted RBP15.26■□□□□ 0.03
C9orf3-217ENST00000479161 MAP1BP46821 2468 aaKnown RBP15.25■□□□□ 0.03
C9orf3-217ENST00000479161 COL27A1Q8IZC6 1860 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-217ENST00000479161 C17orf113A0A1B0GUU1 675 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 MAGEB16A2A368 324 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 CFAP99D6REC4 459 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 SMAPO00193 183 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 QSOX1O00391 747 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 NTN3O00634 580 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-217ENST00000479161 FANCGO15287 622 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 F3P13726 295 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 MC4RP32245 332 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 ITIH4Q14624 930 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 BCL7AQ4VC05 210 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 LYPLAL1Q5VWZ2 237 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 IYDQ6PHW0 289 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 SLC30A9Q6PML9 568 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 ABRAXAS1Q6UWZ7 409 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 ZNF534Q76KX8 674 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 PCGF5Q86SE9 256 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 ARL14Q8N4G2 192 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 TAB3Q8N5C8 712 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-217ENST00000479161 RASGEF1AQ8N9B8 481 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 OR13J1Q8NGT2 312 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 GDAP1Q8TB36 358 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 CPT1BQ92523 772 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 COPS8Q99627 209 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 KIFC1Q9BW19 673 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 XAB2Q9HCS7 855 aaKnown RBP15.25■□□□□ 0.03
C9orf3-217ENST00000479161 ZDHHC3Q9NYG2 299 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 CRLS1Q9UJA2 301 aa15.25■□□□□ 0.03
C9orf3-217ENST00000479161 CPED1A4D0V7 1026 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 MSH3P20585 1137 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 ACRV1P26436 265 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 PPARGP37231 505 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-217ENST00000479161 PTK6Q13882 451 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 AMZ2Q86W34 360 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 PPHLN1Q8NEY8 458 aaKnown RBP15.24■□□□□ 0.03
C9orf3-217ENST00000479161 MAPK15Q8TD08 544 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 SH3KBP1Q96B97 665 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 TTC1Q99614 292 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 ABCG4Q9H172 646 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 UCK1Q9HA47 277 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 SARS2Q9NP81 518 aaKnown RBP15.24■□□□□ 0.03
C9orf3-217ENST00000479161 TREX1Q9NSU2 369 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 SMARCAL1Q9NZC9 954 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 LRIT1Q9P2V4 623 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 DKK4Q9UBT3 224 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 TBC1D29Q9UFV1 150 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 CLCA2Q9UQC9 943 aa15.24■□□□□ 0.03
C9orf3-217ENST00000479161 TMEM8BA6NDV4 472 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 B4DGG1 531 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 TMX2-CTNND1H3BSU7 103 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 MTX2O75431 263 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 AP2A2O94973 939 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 ACP5P13686 325 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 ATP1B2P14415 290 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 JUPP14923 745 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 XRCC1P18887 633 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 IDSP22304 550 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 CASQ1P31415 396 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 FOXN2P32314 431 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 CA5AP35218 305 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 PTGIRP43119 386 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 MAGEA3P43357 314 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 CAMK2BQ13554 666 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 SEPT6Q14141 434 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 DHX34Q14147 1143 aaKnown RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 PERM1Q5SV97 790 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 ZNF648Q5T619 568 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 HES3Q5TGS1 186 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 METRNLQ641Q3 311 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 AFTPHQ6ULP2 937 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 PACS1Q6VY07 963 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 HOOK3Q86VS8 718 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 TRAPPC5Q8IUR0 188 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 RBM12BQ8IXT5 1001 aaKnown RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 PPIL6Q8IXY8 311 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 MPP5Q8N3R9 675 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 BEND7Q8N7W2 519 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-217ENST00000479161 NAT8LQ8N9F0 302 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 GATA6Q92908 595 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.23■□□□□ 0.031e-8■■■■■ 41.2
C9orf3-217ENST00000479161 DCUN1D1Q96GG9 259 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 DEPDC7Q96QD5 511 aa15.23■□□□□ 0.03
C9orf3-217ENST00000479161 DPYSL5Q9BPU6 564 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms