RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KLC4Q9NSK0 619 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 SMOXQ9NWM0 555 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 TRNAU1APQ9NX07 287 aaKnown RBP6.81□□□□□ -1.32
BRCA1-215ENST00000478531 BFARQ9NZS9 450 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 FAM8A1Q9UBU6 413 aa6.81□□□□□ -1.32
BRCA1-215ENST00000478531 LY6G6EA0A0G2JKS1 128 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CCDC162PA2VCL2 907 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 VEGFDO43915 354 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 RFPL3O75679 317 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CKMT1AP12532 417 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SPINK2P20155 84 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CTSCP53634 463 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CLDN6P56747 220 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CACNG1Q06432 222 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 BIRC2Q13490 618 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 LRP8Q14114 963 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 PCID2Q5JVF3 399 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 FNBP1LQ5T0N5 605 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 RNASEH2BQ5TBB1 312 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 LVRNQ6Q4G3 990 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CES3Q6UWW8 571 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 DHRS13Q6UX07 377 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 ERMP1Q7Z2K6 904 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 EFL1Q7Z2Z2 1120 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CAND1Q86VP6 1230 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 PIANPQ8IYJ0 282 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 NXPE1Q8N323 547 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 MPP5Q8N3R9 675 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 OTUD6BQ8N6M0 293 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 BEND7Q8N7W2 519 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 RASGEF1AQ8N9B8 481 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 FAM181AQ8N9Y4 354 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SPATA4Q8NEY3 305 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 PATE1Q8WXA2 126 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SLCO2A1Q92959 643 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 HDAC10Q969S8 669 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 ULK4Q96C45 1275 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 DCUN1D1Q96GG9 259 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CDKN2AIPNLQ96HQ2 116 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SERPINB12Q96P63 405 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 RANBP9Q96S59 729 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 TRIM56Q9BRZ2 755 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 RMI1Q9H9A7 625 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 XAB2Q9HCS7 855 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SPATS2LQ9NUQ6 558 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 EVA1BQ9NVM1 165 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 NCKIPSDQ9NZQ3 722 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SAMD15Q9P1V8 674 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 U3KQA8 63 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 MAP1BP46821 2468 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CFAP47Q6ZTR5 3102 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 TRBV23OR9-2A0A075B6M9 112 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 GPR89AB7ZAQ6 455 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CFAP99D6REC4 459 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 H7C0S8 307 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 AP3B1O00203 1094 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 DNALI1O14645 258 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CHUKO15111 745 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 KMOO15229 486 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 HYAL3O43820 417 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 TOP3BO95985 862 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 GOT2P00505 430 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 ADRB1P08588 477 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 GPR89BP0CG08 455 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 RALBP11234 206 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF7P17097 686 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 ACP1P24666 158 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 ACRV1P26436 265 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 NMBRP28336 390 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 MAGEA6P43360 314 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 NPY2RP49146 381 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 RPIAP49247 311 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 DUSP3P51452 185 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 MAZP56270 477 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 DHX34Q14147 1143 aaKnown RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 KIF26BQ2KJY2 2108 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 GPR33Q49SQ1 333 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 TMEM220Q6QAJ8 160 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 AFTPHQ6ULP2 937 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SYDE1Q6ZW31 735 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 NLRP9Q7RTR0 991 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SERPINA9Q86WD7 417 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF547Q8IVP9 402 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SDR16C5Q8N3Y7 309 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CHCHD4Q8N4Q1 142 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 NAT8LQ8N9F0 302 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 DTX3LQ8TDB6 740 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.8□□□□□ -1.32
BRCA1-215ENST00000478531 CCDC74AQ96AQ1 378 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 MFSD3Q96ES6 412 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SGF29Q96ES7 293 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 COPS8Q99627 209 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 IL1RAPL1Q9NZN1 696 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 SLC23A2Q9UGH3 650 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 PADI4Q9UM07 663 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 MAD1L1Q9Y6D9 718 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 EPG5Q9HCE0 2579 aa6.8□□□□□ -1.32
BRCA1-215ENST00000478531 PDZK1P1A8MUH7 402 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 EFCAB8A8MWE9 144 aa6.79□□□□□ -1.32
BRCA1-215ENST00000478531 GOLGA8KD6RF30 607 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms