RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 KLHL15Q96M94 604 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 RHNO1Q9BSD3 238 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 PTTG2Q9NZH5 202 aa2.76□□□□□ -1.97
HPS3-205ENST00000478525 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.76□□□□□ -1.97
HPS3-205ENST00000478525 AAR2Q9Y312 384 aaKnown RBP2.76□□□□□ -1.97
HPS3-205ENST00000478525 A0A087WW49 117 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 M0QZ24 198 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 SNAP23O00161 211 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 BUD23O43709 281 aaKnown RBP2.75□□□□□ -1.97
HPS3-205ENST00000478525 LIPFP07098 398 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 KRT19P08727 400 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 HOXC9P31274 260 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 CDAP32320 146 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 GNAQP50148 359 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 UFM1P61960 85 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 FOXD4Q12950 439 aaPredicted RBP2.75□□□□□ -1.97
HPS3-205ENST00000478525 EFR3AQ14156 821 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 FGFBP1Q14512 234 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 CTU2Q2VPK5 515 aaKnown RBP2.75□□□□□ -1.97
HPS3-205ENST00000478525 GLIPR1L2Q4G1C9 344 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 PAQR6Q6TCH4 344 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 BBS12Q6ZW61 710 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 SPICE1Q8N0Z3 855 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 GBGT1Q8N5D6 347 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 RTP3Q9BQQ7 232 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 PIGQQ9BRB3 760 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 LAT2Q9GZY6 243 aa2.75□□□□□ -1.97
HPS3-205ENST00000478525 SHROOM4Q9ULL8 1493 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 USP17L23D6RBM5 183 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 PGM1P36871 562 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 CCR10P46092 362 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 GRAPQ13588 217 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 PEX6Q13608 980 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 DRAP1Q14919 205 aaPredicted RBP2.74□□□□□ -1.97
HPS3-205ENST00000478525 DUOXA1Q1HG43 343 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 ASPRV1Q53RT3 343 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 ANO1Q5XXA6 986 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 C11orf53Q8IXP5 236 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 UTP15Q8TED0 518 aaKnown RBP2.74□□□□□ -1.97
HPS3-205ENST00000478525 IGSF8Q969P0 613 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 PYM1Q9BRP8 204 aaKnown RBP2.74□□□□□ -1.97
HPS3-205ENST00000478525 SLC28A3Q9HAS3 691 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 SLC6A13Q9NSD5 602 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 SLC25A10Q9UBX3 287 aaPredicted RBP2.74□□□□□ -1.97
HPS3-205ENST00000478525 TAGLN3Q9UI15 199 aa2.74□□□□□ -1.97
HPS3-205ENST00000478525 CNOT7Q9UIV1 285 aaKnown RBP2.74□□□□□ -1.97
HPS3-205ENST00000478525 TDRD15B5MCY1 1934 aaKnown RBP2.74□□□□□ -1.97
HPS3-205ENST00000478525 IGHV4-4A0A075B6R2 117 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 hCG_1642624A0A1W2PR95 340 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 TNPO2O14787 897 aaKnown RBP2.73□□□□□ -1.97
HPS3-205ENST00000478525 GUCY1B2O75343 617 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 SEC31AO94979 1220 aaKnown RBP2.73□□□□□ -1.97
HPS3-205ENST00000478525 DUS4LO95620 317 aaKnown RBP2.73□□□□□ -1.97
HPS3-205ENST00000478525 RAF1P04049 648 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 FRMD6-AS1P0C7T7 363 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 COX7A2P14406 83 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 CEBPBP17676 345 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 UBA1P22314 1058 aaKnown RBP2.73□□□□□ -1.97
HPS3-205ENST00000478525 EPHA2P29317 976 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 SP3Q02447 781 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 SLC9B1Q4ZJI4 515 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 RAB6CQ53S08 254 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 FBXO47Q5MNV8 452 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 LCN10Q6JVE6 187 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 OR2T12Q8NG77 320 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 OMA1Q96E52 524 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 GIMAP5Q96F15 307 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 SMC6Q96SB8 1091 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 SYT15Q9BQS2 421 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 RAB6CQ9H0N0 254 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 ITM2CQ9NQX7 267 aa2.73□□□□□ -1.97
HPS3-205ENST00000478525 AP2A2O94973 939 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 TRIM49P0CI25 452 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 TRIM49CP0CI26 452 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 CEACAM8P31997 349 aaPredicted RBP2.72□□□□□ -1.97
HPS3-205ENST00000478525 PSMC2P35998 433 aaKnown RBP2.72□□□□□ -1.97
HPS3-205ENST00000478525 PDCD2Q16342 344 aaPredicted RBP2.72□□□□□ -1.97
HPS3-205ENST00000478525 LRRC8DQ7L1W4 858 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 LRRTM1Q86UE6 522 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 PRAG1Q86YV5 1406 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 TMEM143Q96AN5 459 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 RRNAD1Q96FB5 475 aaKnown RBP2.72□□□□□ -1.97
HPS3-205ENST00000478525 SLC47A1Q96FL8 570 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 PELI2Q9HAT8 420 aa2.72□□□□□ -1.97
HPS3-205ENST00000478525 PLK4O00444 970 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 ZNF197O14709 1029 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 TCEA3O75764 348 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 CSPG5O95196 566 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 KCNK5O95279 499 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 DUX4L4P0CJ87 422 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 CAPN2P17655 700 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 CDC25CP30307 473 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 MMP15P51511 669 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 CCR5P51681 352 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 ARL4CP56559 192 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 COX10Q12887 443 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 NDUFAF5Q5TEU4 345 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 IL27RAQ6UWB1 636 aa2.71□□□□□ -1.98
HPS3-205ENST00000478525 ZNF584Q8IVC4 421 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms