RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 LINC00303Q3SY05 128 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 TFDP3Q5H9I0 405 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 KLHL35Q6PF15 583 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 TMEM26Q6ZUK4 368 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 ADGRG6Q86SQ4 1221 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 TRAPPC5Q8IUR0 188 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 ESX1Q8N693 406 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 BMPERQ8N8U9 685 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 EXD3Q8N9H8 876 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 DTX3LQ8TDB6 740 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 TADA1Q96BN2 335 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 LRRC45Q96CN5 670 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 RTP4Q96DX8 246 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 RBM41Q96IZ5 413 aaKnown RBP14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 SLC45A3Q96JT2 553 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 FSD1LQ9BXM9 530 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 SLC25A18Q9H1K4 315 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 PRDM8Q9NQV8 689 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 KLHL3Q9UH77 587 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 PILRAQ9UKJ1 303 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 ADGRG1Q9Y653 693 aa14.24□□□□□ -0.13
SMARCE1-209ENST00000478349 KLHL33A6NCF5 533 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 CST8O60676 142 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 RASSF9O75901 435 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 STK17BO94768 372 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 BPIP17213 487 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 HLA-DPA1P20036 260 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 COMTP21964 271 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 PTPN3P26045 913 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 HADHBP55084 474 aaKnown RBP14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 ITGA9Q13797 1035 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 MAP7Q14244 749 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 PLA2G4EQ3MJ16 856 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 LDLRAP1Q5SW96 308 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 AGAP9Q5VTM2 703 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 MFSD7Q6UXD7 560 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 NPNTQ6UXI9 565 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 WASH2PQ6VEQ5 465 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 CCDC50Q8IVM0 306 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 ZDHHC12Q96GR4 267 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 CALR3Q96L12 384 aaKnown RBP14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 SLC12A9Q9BXP2 914 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 WASH6PQ9NQA3 447 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 TRHDEQ9UKU6 1024 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 DNAJC16Q9Y2G8 782 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 UNC13CQ8NB66 2214 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 KIF26BQ2KJY2 2108 aa14.23□□□□□ -0.13
SMARCE1-209ENST00000478349 SPTA1P02549 2419 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 HACD1B0YJ81 288 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 STK10O94804 968 aaKnown RBP14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 ZRANB2O95218 330 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 IPO7O95373 1038 aaKnown RBP14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 WISP1O95388 367 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 MT-CYBP00156 380 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 C9P02748 559 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 SPAM1P38567 509 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 CDKN2BP42772 138 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 CAPZBP47756 277 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 CSRP3P50461 194 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 WNT3AP56704 352 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 FOXM1Q08050 763 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 MPP3Q13368 585 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 SEPT6Q14141 434 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 IL11RAQ14626 422 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 SPA17Q15506 151 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 SEPT7Q16181 437 aaKnown RBP14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 PPP2R5EQ16537 467 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 CCDC181Q5TID7 509 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 KAZNQ674X7 775 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 ITPRIPL1Q6GPH6 555 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 ABRAXAS1Q6UWZ7 409 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 SPOCD1Q6ZMY3 1216 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 GLT6D1Q7Z4J2 308 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 RCOR2Q8IZ40 523 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 SPATA22Q8NHS9 363 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 PMEPA1Q969W9 287 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 EID2BQ96D98 161 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 ZNF514Q96K75 400 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 C9orf72Q96LT7 481 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 PPP1R2P1Q96PQ5 205 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 CHP1Q99653 195 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 TBC1D10AQ9BXI6 508 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 ULBP3Q9BZM4 244 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 ARFGAP3Q9NP61 516 aa14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 TMEM184BQ9Y519 407 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 PCYT1BQ9Y5K3 369 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-209ENST00000478349 ANXA9O76027 345 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 PYGMP11217 842 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 NFKB1P19838 968 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 CETN2P41208 172 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 ARSDP51689 593 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 CYP4F2P78329 520 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 KCNAB2Q13303 367 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 LONRF2Q1L5Z9 754 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 CRTC2Q53ET0 693 aaPredicted RBP14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 PID1Q7Z2X4 250 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 PRSS42Q7Z5A4 293 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 AMZ2Q86W34 360 aa14.21□□□□□ -0.13
SMARCE1-209ENST00000478349 KATNAL2Q8IYT4 538 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms