RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 MSNP26038 577 aaKnown RBP15.36■□□□□ 0.05
HMGA1-206ENST00000478214 ALDH4A1P30038 563 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 AKT1P31749 480 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 MC4RP32245 332 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 CLCNKAP51800 687 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 PDX1P52945 283 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 OR1D5P58170 312 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 TRIP13Q15645 432 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-206ENST00000478214 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 TTC27Q6P3X3 843 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 IYDQ6PHW0 289 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 ZNF438Q7Z4V0 828 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 NAT14Q8WUY8 206 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 MAGOHBQ96A72 148 aaKnown RBP15.36■□□□□ 0.05
HMGA1-206ENST00000478214 NXPE2Q96DL1 559 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 ATXN7L3BQ96GX2 97 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 C19orf43Q9BQ61 176 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 TIMM29Q9BSF4 260 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 ZCCHC2Q9C0B9 1178 aaKnown RBP15.36■□□□□ 0.05
HMGA1-206ENST00000478214 NRSN2Q9GZP1 204 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 CASS4Q9NQ75 786 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 NLE1Q9NVX2 485 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-206ENST00000478214 CRLS1Q9UJA2 301 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 ZMIZ1Q9ULJ6 1067 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 ATXN7L1Q9ULK2 861 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-206ENST00000478214 SNX12Q9UMY4 172 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 ENTPD2Q9Y5L3 495 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 AK5Q9Y6K8 562 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 DMXL2Q8TDJ6 3036 aa15.36■□□□□ 0.05
HMGA1-206ENST00000478214 APC2O95996 2303 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 MROH6A6NGR9 719 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 OR2AG2A6NM03 316 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 AGAP14A8MT82 685 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 D6RAR5 112 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 TAF4O00268 1085 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 ZNF185O15231 689 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 POP7O75817 140 aaKnown RBP15.35■□□□□ 0.05
HMGA1-206ENST00000478214 PRSS56P0CW18 603 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 F3P13726 295 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 MSH3P20585 1137 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 ITGALP20701 1170 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 ARSDP51689 593 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 BASP1P80723 227 aaKnown RBP15.35■□□□□ 0.05
HMGA1-206ENST00000478214 NR1D2Q14995 579 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 RTP5Q14D33 572 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 AMZ1Q400G9 498 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 TMEM220Q6QAJ8 160 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 C4orf22Q6V702 233 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 DET1Q7L5Y6 550 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 SNX20Q7Z614 316 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 B3GNT8Q7Z7M8 397 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 ZNF761Q86XN6 746 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-206ENST00000478214 NXPE1Q8N323 547 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 STYXQ8WUJ0 223 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 CCDC97Q96F63 343 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-206ENST00000478214 CDKN2AIPNLQ96HQ2 116 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 NAP1L3Q99457 506 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-206ENST00000478214 SLC30A1Q9Y6M5 507 aa15.35■□□□□ 0.05
HMGA1-206ENST00000478214 A0A1W2PNU3 283 aaPredicted RBP15.34■□□□□ 0.05
HMGA1-206ENST00000478214 H7C0S8 307 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 GAS8O95995 478 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 PSMA3P25788 255 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 FASLGP48023 281 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 VPS41P49754 854 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 CDKN1CP49918 316 aaPredicted RBP15.34■□□□□ 0.05
HMGA1-206ENST00000478214 GNG11P61952 73 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 SEPT7Q16181 437 aaKnown RBP15.34■□□□□ 0.05
HMGA1-206ENST00000478214 CYP1B1Q16678 543 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 SKIDA1Q1XH10 827 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 ZRANB3Q5FWF4 1079 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 FNBP1LQ5T0N5 605 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.34■□□□□ 0.05
HMGA1-206ENST00000478214 TMPRSS9Q7Z410 1059 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 PROSER1Q86XN7 944 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 BEND7Q8N7W2 519 aaPredicted RBP15.34■□□□□ 0.05
HMGA1-206ENST00000478214 ACTRT1Q8TDG2 376 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 ULK4Q96C45 1275 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 SGF29Q96ES7 293 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 FOXP3Q9BZS1 431 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 EIF2B3Q9NR50 452 aaKnown RBP15.34■□□□□ 0.05
HMGA1-206ENST00000478214 SCHIP1Q9P0W5 487 aaPredicted RBP15.34■□□□□ 0.05
HMGA1-206ENST00000478214 DKK4Q9UBT3 224 aa15.34■□□□□ 0.05
HMGA1-206ENST00000478214 COL27A1Q8IZC6 1860 aaPredicted RBP15.33■□□□□ 0.05
HMGA1-206ENST00000478214 MYLKQ15746 1914 aa15.33■□□□□ 0.05
HMGA1-206ENST00000478214 KIR2DS5A0A0G2JLQ3 304 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 A0A0G2JNG1 304 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 OR51F1A6NGY5 319 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 OR5K4A6NMS3 321 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 PDZK1P1A8MUH7 402 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 KIR2DS3K7RE56 304 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 CES2O00748 559 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 ZZEF1O43149 2961 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 SGTAO43765 313 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 MPOP05164 745 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 SLC2A4P14672 509 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 ADRA1DP25100 572 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 RPL10P27635 214 aaKnown RBP15.33■□□□□ 0.04
HMGA1-206ENST00000478214 COILP38432 576 aaPredicted RBP15.33■□□□□ 0.04
HMGA1-206ENST00000478214 GPR3P46089 330 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 TERF1P54274 439 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms