RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 INSCQ1MX18 579 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 ZNF569Q5MCW4 686 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 CCDC183Q5T5S1 534 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 CACHD1Q5VU97 1274 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 NCBP2-AS2Q69YL0 99 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 CAPRIN2Q6IMN6 1127 aaKnown RBP9.5□□□□□ -0.89
CCM2-210ENST00000478169 ABRAXAS1Q6UWZ7 409 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 WASH2PQ6VEQ5 465 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 ADGRG6Q86SQ4 1221 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 TMEM135Q86UB9 458 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 BPHLQ86WA6 291 aaPredicted RBP9.5□□□□□ -0.89
CCM2-210ENST00000478169 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.5□□□□□ -0.89
CCM2-210ENST00000478169 TRAM1L1Q8N609 369 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 CPT1CQ8TCG5 803 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 THAP4Q8WY91 577 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 TIMM29Q9BSF4 260 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 SPATA16Q9BXB7 569 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 ADGRE3Q9BY15 652 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 GPR87Q9BY21 358 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 BRD8Q9H0E9 1235 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 ZFYVE1Q9HBF4 777 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 PDE7BQ9NP56 450 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 SLC40A1Q9NP59 571 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 WASH6PQ9NQA3 447 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 LMBRD1Q9NUN5 540 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 SEMA5BQ9P283 1151 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 NFKBIL1Q9UBC1 381 aaPredicted RBP9.5□□□□□ -0.89
CCM2-210ENST00000478169 TTLL3Q9Y4R7 772 aa9.5□□□□□ -0.89
CCM2-210ENST00000478169 CENPEQ02224 2701 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 KIF1CO43896 1103 aaKnown RBP9.49□□□□□ -0.89
CCM2-210ENST00000478169 PDGFAP04085 211 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 CD48P09326 243 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 IDSP22304 550 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 GNLYP22749 145 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 UQCRFS1P47985 274 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 ARSEP51690 589 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 DPYSL3Q14195 570 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 PDK2Q15119 407 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 HADHQ16836 314 aaKnown RBP9.49□□□□□ -0.89
CCM2-210ENST00000478169 UGT8Q16880 541 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 TDRD12Q587J7 1177 aaKnown RBP9.49□□□□□ -0.89
CCM2-210ENST00000478169 AGAP9Q5VTM2 703 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 E4F1Q66K89 784 aaPredicted RBP9.49□□□□□ -0.89
CCM2-210ENST00000478169 CRTC3Q6UUV7 619 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 CLEC17AQ6ZS10 378 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 LRRTM4Q86VH4 590 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 GPR26Q8NDV2 337 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 SSC4DQ8WTU2 575 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 CT55Q8WUE5 264 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 UBXN4Q92575 508 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 RSC1A1Q92681 617 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 GLYATL1Q969I3 302 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 EID2BQ96D98 161 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 ELMO2Q96JJ3 720 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 SLC41A2Q96JW4 573 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 ZNF670Q9BS34 389 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 NUP85Q9BW27 656 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 XPO4Q9C0E2 1151 aaKnown RBP9.49□□□□□ -0.89
CCM2-210ENST00000478169 MAGEE1Q9HCI5 957 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 ARFGAP3Q9NP61 516 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 MLXIPLQ9NP71 852 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 CUEDC1Q9NWM3 386 aaPredicted RBP9.49□□□□□ -0.89
CCM2-210ENST00000478169 SLC23A2Q9UGH3 650 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 ANAPC7Q9UJX3 599 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 RARRES3Q9UL19 164 aa9.49□□□□□ -0.89
CCM2-210ENST00000478169 PCDHGA9Q9Y5G4 932 aaKnown RBP9.49□□□□□ -0.89
CCM2-210ENST00000478169 PIKFYVEQ9Y2I7 2098 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 PDZK1P1A8MUH7 402 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 MYO1FO00160 1098 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 VEGFDO43915 354 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 KCNJ13O60928 360 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 DNAJB5O75953 348 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 MMP2P08253 660 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 SKILP12757 684 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 BRAFP15056 766 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 VCLP18206 1134 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 PTPN4P29074 926 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 CD86P42081 329 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 SSR1P43307 286 aaKnown RBP9.48□□□□□ -0.89
CCM2-210ENST00000478169 PGDP52209 483 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 GPR18Q14330 331 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 SEPT7Q16181 437 aaKnown RBP9.48□□□□□ -0.89
CCM2-210ENST00000478169 FILIP1LQ4L180 1135 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 ZNF648Q5T619 568 aaPredicted RBP9.48□□□□□ -0.89
CCM2-210ENST00000478169 PAPD7Q5XG87 772 aaKnown RBP9.48□□□□□ -0.89
CCM2-210ENST00000478169 ALS2CLQ60I27 953 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 IRGCQ6NXR0 463 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 KLHL35Q6PF15 583 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 FAM92BQ6ZTR7 304 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 TMC3Q7Z5M5 1100 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 SYVN1Q86TM6 617 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 ZNF547Q8IVP9 402 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 MAP7D3Q8IWC1 876 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 KCTD6Q8NC69 237 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 HDAC11Q96DB2 347 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 CXorf40BQ96DE9 158 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 RNF31Q96EP0 1072 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 BTBD6Q96KE9 485 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 SLC25A23Q9BV35 468 aa9.48□□□□□ -0.89
CCM2-210ENST00000478169 TRIM55Q9BYV6 548 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms