RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 DTNBP1Q96EV8 351 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 C6orf62Q9GZU0 229 aaPredicted RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 NOL6Q9H6R4 1146 aaKnown RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 NMRK2Q9NPI5 230 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 IGSF5Q9NSI5 407 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 OLA1Q9NTK5 396 aaKnown RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 CMTM6Q9NX76 183 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 WWOXQ9NZC7 414 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 KIF17Q9P2E2 1029 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 ANKRD6Q9Y2G4 727 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 CEPT1Q9Y6K0 416 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 MGAMO43451 1857 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 SMIM30A4D0T7 59 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 MANSC4A6NHS7 340 aaPredicted RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 FADS2O95864 444 aaKnown RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 CST1P01037 141 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 ATP5BP06576 529 aaKnown RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 AGXTP21549 392 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 RAD51Q06609 339 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 SELPLGQ14242 412 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 SEMA3AQ14563 771 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 RAB39AQ14964 217 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 STXBP5Q5T5C0 1151 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 TIGD7Q6NT04 549 aaPredicted RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 TBPL2Q6SJ96 375 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 FUNDC1Q8IVP5 155 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 OR52J3Q8NH60 311 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 BBS2Q9BXC9 721 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 C1QTNF1Q9BXJ1 281 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 TDRD1Q9BXT4 1180 aaKnown RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 EBPLQ9BY08 206 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 ATP13A1Q9HD20 1204 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 NDUFA13Q9P0J0 144 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 IFT80Q9P2H3 777 aaPredicted RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 DOCK3Q8IZD9 2030 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 ANK1P16157 1881 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 ACOT8O14734 319 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 MATN3O15232 486 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 SNAP91O60641 907 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 ECI2O75521 394 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 SERPINF2P08697 491 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 POU2F1P14859 743 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 HSPA13P48723 471 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 FLT3LGP49771 235 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 HSPA14Q0VDF9 509 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 BOP1Q14137 746 aaKnown RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 CYP2A13Q16696 494 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 SYT16Q17RD7 645 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 TMEM236Q5W0B7 351 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 FBXL22Q6P050 247 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 TPGS1Q6ZTW0 290 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 NEK10Q6ZWH5 1172 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 GPSM1Q86YR5 675 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 AHI1Q8N157 1196 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 UBE2J2Q8N2K1 259 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 FAM86B1Q8N7N1 296 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 OR4L1Q8NH43 312 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 PSMA8Q8TAA3 256 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 SLC30A3Q99726 388 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 FARSBQ9NSD9 589 aaKnown RBP9.68□□□□□ -0.86
CMC1-209ENST00000477739 HSFX1Q9UBD0 423 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 SNX8Q9Y5X2 465 aa9.68□□□□□ -0.86
CMC1-209ENST00000477739 ANKRD33BA6NCL7 494 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 K7EPI3 171 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 H2AFYO75367 372 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 G6PDP11413 515 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 CCNCP24863 283 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 SLC7A1P30825 629 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 MC4RP32245 332 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 CLCN2P51788 898 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 ZNF135P52742 658 aaPredicted RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 CDK18Q07002 472 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 LRRC74AQ0VAA2 488 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 CBX3Q13185 183 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 FAM174BQ3ZCQ3 159 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 NHSL2Q5HYW2 709 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 ANKRD26P1Q6NSI1 321 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 ISCA2Q86U28 154 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 ZDHHC13Q8IUH4 622 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 CILP2Q8IUL8 1156 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 KRTCAP2Q8N6L1 136 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 HMGCLL1Q8TB92 370 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 CNIH3Q8TBE1 160 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 EXOSC4Q9NPD3 245 aaKnown RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 OLAHQ9NV23 265 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 OSER1Q9NX31 292 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 TAS2R13Q9NYV9 303 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 DNAJB4Q9UDY4 337 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 TRIP12Q14669 1992 aaPredicted RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 MGEA5O60502 916 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 SLC22A3O75751 556 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 C1RP00736 705 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 PBLDP30039 288 aaPredicted RBP9.67□□□□□ -0.86
CMC1-209ENST00000477739 TGFBR1P36897 503 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 KCNA10Q16322 511 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 C6orf183Q5T699 404 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 PIK3R6Q5UE93 754 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 ABRAXAS1Q6UWZ7 409 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 ITIH5Q86UX2 942 aa9.67□□□□□ -0.86
CMC1-209ENST00000477739 TTC30BQ8N4P2 665 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms