RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 DMRTB1Q96MA1 342 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 APOL6Q9BWW8 343 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 FAM49AQ9H0Q0 323 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 FAM124BQ9H5Z6 455 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PCDHB16Q9NRJ7 776 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ING3Q9NXR8 418 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 WARS2Q9UGM6 360 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 SRRDQ9UH36 339 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 CYB5R1Q9UHQ9 305 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 PFDN2Q9UHV9 154 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 AGO1Q9UL18 857 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 ACOT9Q9Y305 439 aa12.57□□□□□ -0.4
RTFDC1-207ENST00000477573 MBLAC1A4D2B0 266 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 RGSL1A5PLK6 1076 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 E7ENX8 843 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 TOR1BO14657 336 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 TBX1O43435 398 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 MED7O43513 233 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 DFNA5O60443 496 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CALCAP01258 141 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 BPGMP07738 259 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 NFICP08651 508 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 IFI30P13284 250 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 HLA-FP30511 346 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CAPGP40121 348 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 GDI2P50395 445 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 PTPN5P54829 565 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 FAPQ12884 760 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 TRIM25Q14258 630 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 TMEM81Q6P7N7 255 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 GPAT4Q86UL3 456 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CELF2-AS1Q8N7Q2 184 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 C1orf127Q8N9H9 656 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 PBXIP1Q96AQ6 731 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 PHF21AQ96BD5 680 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 MSANTD3Q96H12 275 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CNDP1Q96KN2 507 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 BDH2Q9BUT1 245 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 UCK2Q9BZX2 261 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 ROGDIQ9GZN7 287 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 NIPAL2Q9H841 368 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 COPG1Q9Y678 874 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 TCRBV3S1A0A5B6 114 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 A8MUA0 341 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 AXIN1O15169 862 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 SYNCRIPO60506 623 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 PSIP1O75475 530 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 PROS1P07225 676 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 MYL3P08590 195 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 WEE2P0C1S8 567 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CLEC2LP0C7M8 214 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CD53P19397 219 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 ASPAP45381 313 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 NUMBP49757 651 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 IL1RL1Q01638 556 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 GPR50Q13585 617 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 STARD3Q14849 445 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CCL14Q16627 93 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 SLC10A6Q3KNW5 377 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 FUT11Q495W5 492 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CES4AQ5XG92 561 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 TIGD3Q6B0B8 471 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 NOTUMQ6P988 496 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 SLC27A1Q6PCB7 646 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 SCARA5Q6ZMJ2 495 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 USP51Q70EK9 711 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 ERMP1Q7Z2K6 904 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 ZSWIM9Q86XI8 627 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 P3H2Q8IVL5 708 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 GPALPP1Q8IXQ4 340 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 DYNC2LI1Q8TCX1 351 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 GANCQ8TET4 914 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 DEDD2Q8WXF8 326 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 AKAP1Q92667 903 aaKnown RBP eCLIP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 MYDGFQ969H8 173 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 PHOX2BQ99453 314 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 NUSAP1Q9BXS6 441 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 CYP3A43Q9HB55 503 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 TAS2R9Q9NYW1 312 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 HSPE1-MOB4S4R3N1 261 aa12.56□□□□□ -0.4
RTFDC1-207ENST00000477573 GNB5O14775 395 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 AKR1A1P14550 325 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 POU2F1P14859 743 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 FGFR3P22607 806 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 SEPHS1P49903 392 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 DGKQP52824 942 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 HSD17B7P56937 341 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 NKX3-2P78367 333 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 RBP5P82980 135 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 CRHR2Q13324 411 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 ZNF273Q14593 569 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 KCNJ11Q14654 390 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 SKIV2LQ15477 1246 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 RBM48Q5RL73 367 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 ARMC4Q5T2S8 1044 aa12.55□□□□□ -0.4
RTFDC1-207ENST00000477573 HMBOX1Q6NT76 420 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms