RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 VPS18Q9P253 973 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 TBC1D29Q9UFV1 150 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 FEZ2Q9UHY8 353 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 APPL1Q9UKG1 709 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 DNAJC16Q9Y2G8 782 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 AAR2Q9Y312 384 aaKnown RBP8.18□□□□□ -1.1
HDAC6-221ENST00000477561 KCTD3Q9Y597 815 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 ARL5AQ9Y689 179 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 CACNA1BQ00975 2339 aa8.18□□□□□ -1.1
HDAC6-221ENST00000477561 RP1P56715 2156 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 GLYATL1P3A0A0U1RQE8 302 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 C5orf60A6NFR6 353 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 FAM187AA6NFU0 413 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 D6RAR5 112 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 STX7O15400 261 aaKnown RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 NUDT21O43809 227 aaKnown RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 CDK14O94921 469 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 METTL18O95568 372 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 RHOXF2BP0C7M4 288 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 HGFP14210 728 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 PNLIPP16233 465 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 MPSTP25325 297 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 RBMS1P29558 406 aaKnown RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 ADRA1AP35348 466 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 ACTN2P35609 894 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 SPAM1P38567 509 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 EIF2S3P41091 472 aaKnown RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 LSSP48449 732 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 INHBCP55103 352 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 TMPRSS15P98073 1019 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 TMEM115Q12893 351 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 NFATC2Q13469 925 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 SNX1Q13596 522 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 LRP8Q14114 963 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 DHX34Q14147 1143 aaKnown RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 CYP1B1Q16678 543 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 INSCQ1MX18 579 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 TBC1D25Q3MII6 688 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 PDPK2PQ6A1A2 396 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 RANBP10Q6VN20 620 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 MICALCLQ6ZW33 695 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 PRUNE1Q86TP1 453 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 PHYKPLQ8IUZ5 450 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 OR4K2Q8NGD2 314 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 SLC35B2Q8TB61 432 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 SLC37A2Q8TED4 501 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 GRK7Q8WTQ7 553 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 NAT14Q8WUY8 206 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 C1orf54Q8WWF1 131 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 FGF11Q92914 225 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 CRELD1Q96HD1 420 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 PLEKHG4BQ96PX9 1271 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 TBL1YQ9BQ87 522 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 RHOXF2Q9BQY4 288 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 SEMA6CQ9H3T2 930 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 OSGEPL1Q9H4B0 414 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 RMI1Q9H9A7 625 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 PRDM8Q9NQV8 689 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 PIH1D1Q9NWS0 290 aaKnown RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 HACD3Q9P035 362 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 NFKBIL1Q9UBC1 381 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 SLC23A2Q9UGH3 650 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 LHX6Q9UPM6 363 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 PKP3Q9Y446 797 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 DSPP15924 2871 aaKnown RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 CFAP47Q6ZTR5 3102 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 COL27A1Q8IZC6 1860 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-221ENST00000477561 KNTC1P50748 2209 aa8.17□□□□□ -1.1
HDAC6-221ENST00000477561 CCDC187A0A096LP49 1063 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 C2orf81A6NN90 581 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 CCL22O00626 93 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 GAPDHSO14556 408 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ERLIN1O75477 346 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 TNFSF15O95150 251 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ETS1P14921 441 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 TPH1P17752 444 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 LPOP22079 712 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 CD1CP29017 333 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 COILP38432 576 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 DR1Q01658 176 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 PEX6Q13608 980 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 BRD3Q15059 726 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 SIX1Q15475 284 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 SEPT7Q16181 437 aaKnown RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 CCNG2Q16589 344 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 KCTD19Q17RG1 926 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 PARP6Q2NL67 630 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 MAP9Q49MG5 647 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 PHF19Q5T6S3 580 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 GPRC6AQ5T6X5 926 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 WDR93Q6P2C0 686 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 IYDQ6PHW0 289 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF574Q6ZN55 896 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 LRRC69Q6ZNQ3 347 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 SYDE1Q6ZW31 735 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-221ENST00000477561 RAB11FIP2Q7L804 512 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 ZNF438Q7Z4V0 828 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 PIM3Q86V86 326 aa8.16□□□□□ -1.1
HDAC6-221ENST00000477561 LRRTM4Q86VH4 590 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms