RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	RSRC1	Q96IZ7	334 aa	Known RBP	4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	CTAGE1	Q96RT6	745 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	DDO	Q99489	341 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	TUBA1C	Q9BQE3	449 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	TMX4	Q9H1E5	349 aa	Predicted RBP	4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	RAD21L1	Q9H4I0	556 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	POU2F3	Q9UKI9	436 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	PROCR	Q9UNN8	238 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	CGNL1	Q0VF96	1302 aa		4.13	□□□□□ -1.75
RBM39-231	ENST00000477334	OR2A25	A4D2G3	310 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334		K7ENM7	598 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	ZBTB43	O43298	467 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	TMCC2	O75069	709 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	LDB3	O75112	727 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	MMP9	P14780	707 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	IL15	P40933	162 aa	Predicted RBP	4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	MMP14	P50281	582 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	CD81	P60033	236 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	KRTAP10-6	P60371	365 aa	Predicted RBP	4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	ERVFC1-1	P60608	527 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	EPS8	Q12929	822 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	GTF2H2	Q13888	395 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	ZNF234	Q14588	700 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	MEP1A	Q16819	746 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	SYT16	Q17RD7	645 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	OR7E24	Q6IFN5	339 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	GTF2H2C	Q6P1K8	395 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	ASB18	Q6ZVZ8	466 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	SLC9B2	Q86UD5	537 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	PM20D2	Q8IYS1	436 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	SLC5A8	Q8N695	610 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	POC5	Q8NA72	575 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	SLC38A9	Q8NBW4	561 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	LNX1	Q8TBB1	728 aa	Predicted RBP	4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	LMLN	Q96KR4	655 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	GFI1	Q99684	422 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	SYT17	Q9BSW7	474 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	MXD3	Q9BW11	206 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	LRMDA	Q9H2I8	198 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	EVA1A	Q9H8M9	152 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	TMEM5	Q9Y2B1	443 aa		4.12	□□□□□ -1.75
RBM39-231	ENST00000477334	PTRH2	Q9Y3E5	179 aa	Known RBP	4.12	□□□□□ -1.75
RBM39-231	ENST00000477334		A0A1B0GUV1	79 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334		A0A1W2PP11	408 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	TMEM8B	A6NDV4	472 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	LRRC72	A6NJI9	287 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	PRR23D1	E9PI22	279 aa	Predicted RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	TMEM178B	H3BS89	294 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	TMEM189-UBE2V1	I3L0A0	370 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334		J3QR06	171 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	ZNHIT1	O43257	154 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	ZNF217	O75362	1048 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	RSL1D1	O76021	490 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	LDHC	P07864	332 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	SELL	P14151	372 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	BDNF	P23560	247 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	EIF2D	P41214	584 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	NRIP1	P48552	1158 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	GAS1	P54826	345 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	PLIN5	Q00G26	463 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	UBE2V1	Q13404	147 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	MVP	Q14764	893 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	STXBP5	Q5T5C0	1151 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	EPHX4	Q8IUS5	362 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	CEP97	Q8IW35	865 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	DCP1B	Q8IZD4	617 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	IL17RC	Q8NAC3	791 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	POC1A	Q8NBT0	407 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	JAKMIP2	Q96AA8	810 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	LRRC59	Q96AG4	307 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	CEP295NL	Q96MC4	621 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	PAFAH2	Q99487	392 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	PKP4	Q99569	1192 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	PLSCR4	Q9NRQ2	329 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	ARHGEF38	Q9NXL2	777 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	KLHL9	Q9P2J3	617 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	SEC63	Q9UGP8	760 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	TSPYL4	Q9UJ04	414 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	EXO1	Q9UQ84	846 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	ZNF711	Q9Y462	761 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	PCDHGA5	Q9Y5G8	931 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	PRAG1	Q86YV5	1406 aa		4.11	□□□□□ -1.75
RBM39-231	ENST00000477334	ASPDH	A6ND91	283 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	OR5K3	A6NET4	321 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334		A8MV72	311 aa	Predicted RBP	4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	EIF3D	O15371	548 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	BUB3	O43684	328 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	WDR1	O75083	606 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	ENTPD3	O75355	529 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	BEST1	O76090	585 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	GH2	P01242	217 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	FAM106CP	P0CH98	169 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	KCNA5	P22460	613 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	DGKA	P23743	735 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	NMBR	P28336	390 aa		4.1	□□□□□ -1.75
RBM39-231	ENST00000477334	TMF1	P82094	1093 aa		4.1	□□□□□ -1.75

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