RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 WASH2PQ6VEQ5 465 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 PPP1R21Q6ZMI0 780 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 NLRP9Q7RTR0 991 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 SPRED1Q7Z699 444 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 PRUNE1Q86TP1 453 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 RASGEF1AQ8N9B8 481 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 Q8N9G6 341 aaPredicted RBP13.24□□□□□ -0.29
ACTN4-205ENST00000477174 COG1Q8WTW3 980 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 HEXDCQ8WVB3 486 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 MAGOHBQ96A72 148 aaKnown RBP13.24□□□□□ -0.29
ACTN4-205ENST00000477174 CDKN2AIPNLQ96HQ2 116 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 CASS4Q9NQ75 786 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 WASH6PQ9NQA3 447 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 SLC23A2Q9UGH3 650 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 RIMKLBQ9ULI2 386 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 SNX12Q9UMY4 172 aa13.24□□□□□ -0.29
ACTN4-205ENST00000477174 ARHGEF17Q96PE2 2063 aaPredicted RBP13.24□□□□□ -0.29
ACTN4-205ENST00000477174 MAP1BP46821 2468 aaKnown RBP13.23□□□□□ -0.29
ACTN4-205ENST00000477174 PLXNB3Q9ULL4 1909 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 TRBV23OR9-2A0A075B6M9 112 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 HEATR9A2RTY3 570 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 PRR19A6NJB7 356 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 PPM1DO15297 605 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 POP7O75817 140 aaKnown RBP13.23□□□□□ -0.29
ACTN4-205ENST00000477174 EML2O95834 649 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 RALBP11234 206 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 MSH3P20585 1137 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 ITGALP20701 1170 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 IDSP22304 550 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 ADRA1DP25100 572 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 ALDH4A1P30038 563 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 CA5AP35218 305 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 TMPRSS15P98073 1019 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 SQSTM1Q13501 440 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 CYP1B1Q16678 543 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 INSCQ1MX18 579 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 TMEM220Q6QAJ8 160 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 ABRAXAS1Q6UWZ7 409 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 C11orf96Q7Z7L8 435 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 SLC9B2Q86UD5 537 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 AMZ2Q86W34 360 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 TRAPPC5Q8IUR0 188 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 NXPE1Q8N323 547 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 SLC37A2Q8TED4 501 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 PATE1Q8WXA2 126 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 ZCCHC14Q8WYQ9 949 aaKnown RBP13.23□□□□□ -0.29
ACTN4-205ENST00000477174 PEX13Q92968 403 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 SH3KBP1Q96B97 665 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 DCUN1D1Q96GG9 259 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 DNAJC1Q96KC8 554 aaKnown RBP13.23□□□□□ -0.29
ACTN4-205ENST00000477174 TMEM74Q96NL1 305 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 RANBP9Q96S59 729 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 AP1M1Q9BXS5 423 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 SARS2Q9NP81 518 aaKnown RBP13.23□□□□□ -0.29
ACTN4-205ENST00000477174 PRDM8Q9NQV8 689 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 PIH1D1Q9NWS0 290 aaKnown RBP13.23□□□□□ -0.29
ACTN4-205ENST00000477174 CRLS1Q9UJA2 301 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 AK5Q9Y6K8 562 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 SLC30A1Q9Y6M5 507 aa13.23□□□□□ -0.29
ACTN4-205ENST00000477174 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.22□□□□□ -0.29
ACTN4-205ENST00000477174 GOLGA6L10A0A0M3HER8 536 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 USP27XA6NNY8 438 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 D6RAR5 112 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 GPR39O43194 453 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 SNX2O60749 519 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 CPNE6O95741 557 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 TCP1P17987 556 aaKnown RBP13.22□□□□□ -0.29
ACTN4-205ENST00000477174 XRCC1P18887 633 aaPredicted RBP13.22□□□□□ -0.29
ACTN4-205ENST00000477174 AKT1P31749 480 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 MC4RP32245 332 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 COILP38432 576 aaPredicted RBP13.22□□□□□ -0.29
ACTN4-205ENST00000477174 GRIA1P42261 906 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 LSSP48449 732 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 OR1D5P58170 312 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 GNG11P61952 73 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 BASP1P80723 227 aaKnown RBP13.22□□□□□ -0.29
ACTN4-205ENST00000477174 DMPKQ09013 629 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 CCDC173Q0VFZ6 552 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 SEPT6Q14141 434 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.22□□□□□ -0.29
ACTN4-205ENST00000477174 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 PIM3Q86V86 326 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 PROSER1Q86XN7 944 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 SGF29Q96ES7 293 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 ATXN7L3BQ96GX2 97 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 COPS8Q99627 209 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 DPYSL5Q9BPU6 564 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.22□□□□□ -0.29
ACTN4-205ENST00000477174 STRADBQ9C0K7 418 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 OSGEPL1Q9H4B0 414 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 STN1Q9H668 368 aaKnown RBP13.22□□□□□ -0.29
ACTN4-205ENST00000477174 SYNDIG1Q9H7V2 258 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 POLR1BQ9H9Y6 1135 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 ZMIZ1Q9ULJ6 1067 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 PCDHB1Q9Y5F3 818 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 ENTPD2Q9Y5L3 495 aa13.22□□□□□ -0.29
ACTN4-205ENST00000477174 BPTFQ12830 3046 aa13.21□□□□□ -0.29
ACTN4-205ENST00000477174 ACACAQ13085 2346 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms