RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 LYPLAL1Q5VWZ2 237 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 KIAA0930Q6ICG6 404 aaPredicted RBP29.19■■■□□ 2.26
HOXB3-208ENST00000476342 CES3Q6UWW8 571 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 TRAPPC5Q8IUR0 188 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 BAHD1Q8TBE0 780 aaPredicted RBP29.19■■■□□ 2.26
HOXB3-208ENST00000476342 ZNF669Q96BR6 464 aaPredicted RBP29.19■■■□□ 2.26
HOXB3-208ENST00000476342 ZNF514Q96K75 400 aaPredicted RBP29.19■■■□□ 2.26
HOXB3-208ENST00000476342 NAT9Q9BTE0 207 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 RPS6KL1Q9Y6S9 549 aa29.19■■■□□ 2.26
HOXB3-208ENST00000476342 PCNX2A6NKB5 2137 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 TP73O15350 636 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 PPARGP37231 505 aaPredicted RBP29.18■■■□□ 2.26
HOXB3-208ENST00000476342 CDKN1CP49918 316 aaPredicted RBP29.18■■■□□ 2.26
HOXB3-208ENST00000476342 AARS2Q5JTZ9 985 aaKnown RBP29.18■■■□□ 2.26
HOXB3-208ENST00000476342 ZCCHC8Q6NZY4 707 aaKnown RBP29.18■■■□□ 2.26
HOXB3-208ENST00000476342 CRTC3Q6UUV7 619 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 CERS6Q6ZMG9 384 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 TMEM135Q86UB9 458 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 PIANPQ8IYJ0 282 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 NOA1Q8NC60 698 aaKnown RBP29.18■■■□□ 2.26
HOXB3-208ENST00000476342 CCL4L1Q8NHW4 92 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 CARD6Q9BX69 1037 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 CATSPERZQ9NTU4 200 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 GPR34Q9UPC5 381 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 PRKAB1Q9Y478 270 aa29.18■■■□□ 2.26
HOXB3-208ENST00000476342 PCYT1BQ9Y5K3 369 aaPredicted RBP29.18■■■□□ 2.26
HOXB3-208ENST00000476342 TRIM38O00635 465 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 USP1O94782 785 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 PRSS56P0CW18 603 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 CEACAM1P13688 526 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 DEKP35659 375 aaKnown RBP29.17■■■□□ 2.26
HOXB3-208ENST00000476342 ID4P47928 161 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 CAV1Q03135 178 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 ANKRD20A4Q4UJ75 823 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 GLE1Q53GS7 698 aaKnown RBP29.17■■■□□ 2.26
HOXB3-208ENST00000476342 C6orf132Q5T0Z8 1188 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 AGGF1Q8N302 714 aaeCLIP29.17■■■□□ 2.26
HOXB3-208ENST00000476342 RASGEF1AQ8N9B8 481 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 LRRC39Q96DD0 335 aa29.17■■■□□ 2.26
HOXB3-208ENST00000476342 IGLV3-16A0A075B6K0 115 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 SIGLEC6O43699 453 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 VAPBO95292 243 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 LDOC1O95751 146 aaPredicted RBP29.16■■■□□ 2.26
HOXB3-208ENST00000476342 POLBP06746 335 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 ACP5P13686 325 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 PGAM1P18669 254 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 AK4P27144 223 aaPredicted RBP29.16■■■□□ 2.26
HOXB3-208ENST00000476342 ACTR1BP42025 376 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 NOVA1P51513 510 aaKnown RBP29.16■■■□□ 2.26
HOXB3-208ENST00000476342 DRG2P55039 364 aaKnown RBP29.16■■■□□ 2.26
HOXB3-208ENST00000476342 ACTR1AP61163 376 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 SLC7A5Q01650 507 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 ITIH4Q14624 930 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 MSS51Q4VC12 460 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 CCNJLQ8IV13 435 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 GLMNQ92990 594 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 CNDP2Q96KP4 475 aaKnown RBP29.16■■■□□ 2.26
HOXB3-208ENST00000476342 GRHL1Q9NZI5 618 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 NCKIPSDQ9NZQ3 722 aa29.16■■■□□ 2.26
HOXB3-208ENST00000476342 SPTBN4Q9H254 2564 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 DCDC2BA2VCK2 349 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 OR2AG2A6NM03 316 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 ATP1B2P14415 290 aaPredicted RBP29.15■■■□□ 2.26
HOXB3-208ENST00000476342 DBN1Q16643 649 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 INSCQ1MX18 579 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 SLC30A9Q6PML9 568 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 TMEM220Q6QAJ8 160 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 MICALCLQ6ZW33 695 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 NRROSQ86YC3 692 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 FAM181AQ8N9Y4 354 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 FAM46DQ8NEK8 389 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 EBNA1BP2Q99848 306 aaKnown RBP29.15■■■□□ 2.26
HOXB3-208ENST00000476342 TIMM29Q9BSF4 260 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 EVA1BQ9NVM1 165 aa29.15■■■□□ 2.26
HOXB3-208ENST00000476342 GOLGA4Q13439 2230 aaKnown RBP29.15■■■□□ 2.26
HOXB3-208ENST00000476342 CNOT1A5YKK6 2376 aaKnown RBP29.15■■■□□ 2.26
HOXB3-208ENST00000476342 CD3EAPO15446 510 aaKnown RBP29.14■■■□□ 2.26
HOXB3-208ENST00000476342 TTC4O95801 387 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 CTSCP53634 463 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 B4GALNT1Q00973 533 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 TRIP6Q15654 476 aaKnown RBP29.14■■■□□ 2.26
HOXB3-208ENST00000476342 DET1Q7L5Y6 550 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 ZNF547Q8IVP9 402 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 OTUD6BQ8N6M0 293 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 PWWP2AQ96N64 755 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 TRIM56Q9BRZ2 755 aaKnown RBP29.14■■■□□ 2.26
HOXB3-208ENST00000476342 BOCQ9BWV1 1114 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 DPEP2Q9H4A9 486 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 TAAR2Q9P1P5 351 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 PLEKHM1Q9Y4G2 1056 aa29.14■■■□□ 2.26
HOXB3-208ENST00000476342 DNMT3AQ9Y6K1 912 aaPredicted RBP29.14■■■□□ 2.26
HOXB3-208ENST00000476342 ARHGEF17Q96PE2 2063 aaPredicted RBP29.14■■■□□ 2.26
HOXB3-208ENST00000476342 TNFSF14O43557 240 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 BANF1O75531 89 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 KCNK5O95279 499 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 ZNF7P17097 686 aaPredicted RBP29.13■■■□□ 2.25
HOXB3-208ENST00000476342 VCLP18206 1134 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 ARNTP27540 789 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 NSG1P42857 185 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 PROX2Q3B8N5 592 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms