RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PPP2R2BQ00005 443 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 SPOCK1Q08629 439 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 STK4Q13043 487 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 COASYQ13057 564 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 TOMM20Q15388 145 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 TMEM35AQ53FP2 167 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 CFAP58Q5T655 872 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 IRAK1BP1Q5VVH5 260 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 TMPRSS12Q86WS5 348 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 PM20D2Q8IYS1 436 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 BBS10Q8TAM1 723 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 DDOQ99489 341 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 TEX12Q9BXU0 123 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 SLCO5A1Q9H2Y9 848 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 RAD21L1Q9H4I0 556 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 ARHGEF38Q9NXL2 777 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 TERF2IPQ9NYB0 399 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 RPS6KA6Q9UK32 745 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 PTRH2Q9Y3E5 179 aaKnown RBP4.82□□□□□ -1.64
PTCD3-211ENST00000476215 OR2W1Q9Y3N9 320 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 SNX8Q9Y5X2 465 aa4.82□□□□□ -1.64
PTCD3-211ENST00000476215 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.82□□□□□ -1.64
PTCD3-211ENST00000476215 CGNL1Q0VF96 1302 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 OR2A25A4D2G3 310 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 TMEM8BA6NDV4 472 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SLC16A5O15375 505 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 ZBTB43O43298 467 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 GH2P01242 217 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 CDH1P12830 882 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 HLA-DOBP13765 273 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SELLP14151 372 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 HRH2P25021 359 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 IL15P40933 162 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-211ENST00000476215 ZNF234Q14588 700 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 MVPQ14764 893 aaKnown RBP4.81□□□□□ -1.64
PTCD3-211ENST00000476215 MEP1AQ16819 746 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SYT16Q17RD7 645 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SPSB3Q6PJ21 355 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 RAD9BQ6WBX8 426 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 C18orf65Q6ZTR6 163 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 ENOSF1Q7L5Y1 443 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 AACSQ86V21 672 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 KBTBD6Q86V97 674 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 KMT5CQ86Y97 462 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 MCEMP1Q8IX19 187 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SLC5A8Q8N695 610 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 IL17RCQ8NAC3 791 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SLC38A9Q8NBW4 561 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SECTM1Q8WVN6 248 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 LRRC59Q96AG4 307 aaKnown RBP4.81□□□□□ -1.64
PTCD3-211ENST00000476215 CEP295NLQ96MC4 621 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 SYT17Q9BSW7 474 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 EBF2Q9HAK2 575 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 PDE7BQ9NP56 450 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 POU2F3Q9UKI9 436 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 PCDHAC2Q9Y5I4 1007 aa4.81□□□□□ -1.64
PTCD3-211ENST00000476215 CNTNAP2Q9UHC6 1331 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 A0A1W2PP11 408 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 SMTNL1A8MU46 457 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 TMEM189-UBE2V1I3L0A0 370 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 J3QR06 171 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 TULP2O00295 520 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 PAPSS1O43252 624 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 ENTPD3O75355 529 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 ZNF217O75362 1048 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 RSL1D1O76021 490 aaKnown RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 SNRNP70P08621 437 aaKnown RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 KCNA5P22460 613 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 PNLIPRP2P54317 469 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 RRP1P56182 461 aaKnown RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 CD81P60033 236 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 PLIN5Q00G26 463 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 UBE2V1Q13404 147 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 GTF2H2Q13888 395 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 KRT33BQ14525 404 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 NTRK2Q16620 822 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 ZDHHC20Q5W0Z9 365 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 GTF2H2CQ6P1K8 395 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 ZNF704Q6ZNC4 412 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 TPRG1Q6ZUI0 275 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 TUBA1AQ71U36 451 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 CEP97Q8IW35 865 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 GCSAMQ8N6F7 178 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 SPATA20Q8TB22 786 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 PPP4R1Q8TF05 950 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 SORCS1Q8WY21 1168 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 FAM84BQ96KN1 310 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 TTC14Q96N46 770 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 PAFAH2Q99487 392 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 GFI1Q99684 422 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 TUBA1CQ9BQE3 449 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 KIFC3Q9BVG8 833 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 LRMDAQ9H2I8 198 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 OSGEPL1Q9H4B0 414 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 RETREG1Q9H6L5 497 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 MRPL15Q9P015 296 aaKnown RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 DNAJB4Q9UDY4 337 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 CHORDC1Q9UHD1 332 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms