RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CENPLQ8N0S6 344 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-217ENST00000475693 ISL2Q96A47 359 aa17.89■□□□□ 0.45
ATG4B-217ENST00000475693 TCF12Q99081 682 aa17.89■□□□□ 0.45
ATG4B-217ENST00000475693 PLCD4Q9BRC7 762 aa17.89■□□□□ 0.45
ATG4B-217ENST00000475693 FAM8A1Q9UBU6 413 aa17.89■□□□□ 0.45
ATG4B-217ENST00000475693 CYP8B1Q9UNU6 501 aa17.89■□□□□ 0.45
ATG4B-217ENST00000475693 SDK1Q7Z5N4 2213 aa17.89■□□□□ 0.45
ATG4B-217ENST00000475693 OR2AG2A6NM03 316 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 KIF1CO43896 1103 aaKnown RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 RNGTTO60942 597 aaKnown RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TM7SF2O76062 418 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TRIM16O95361 564 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PKMP14618 531 aaKnown RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 CHRM3P20309 590 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PTGER3P43115 390 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 MTAPQ13126 283 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 CSHL1Q14406 222 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 ZKSCAN8Q15776 578 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 ZNF284Q2VY69 593 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 N4BP2L1Q5TBK1 243 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 LVRNQ6Q4G3 990 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PAQR3Q6TCH7 311 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 SYT13Q7L8C5 426 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TRPM8Q7Z2W7 1104 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 GBP7Q8N8V2 638 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 ARMC2Q8NEN0 867 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 GABPB2Q8TAK5 448 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 SHDQ96IW2 340 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 MECRQ9BV79 373 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 LGR4Q9BXB1 951 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 C1QTNF1Q9BXJ1 281 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 GPAMQ9HCL2 828 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 ACSS2Q9NR19 701 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 SENP1Q9P0U3 644 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 MRPS17Q9Y2R5 130 aaKnown RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 OAS3Q9Y6K5 1087 aaKnown RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PIKFYVEQ9Y2I7 2098 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 WDR87Q6ZQQ6 2873 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 FRYLO94915 3013 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PRMT5O14744 637 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PRPF4O43172 522 aaKnown RBP eCLIP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TSPAN6O43657 245 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 SLC25A14O95258 325 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 FDXRP22570 491 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 AKT1P31749 480 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 GPR1P46091 355 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 POU4F1Q01851 419 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 GPR33Q49SQ1 333 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 AARS2Q5JTZ9 985 aaKnown RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 GALNT7Q86SF2 657 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 LRRC34Q8IZ02 419 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TRAM1L1Q8N609 369 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PJA1Q8NG27 643 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 MOCOSQ96EN8 888 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 COPS8Q99627 209 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 CPSF2Q9P2I0 782 aaKnown RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TLK1Q9UKI8 766 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 RUVBL2Q9Y230 463 aaKnown RBP17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TMEM98Q9Y2Y6 226 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 OR1A2Q9Y585 309 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PLXNA2O75051 1894 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 TTC28Q96AY4 2481 aa17.88■□□□□ 0.45
ATG4B-217ENST00000475693 PSMD11O00231 422 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 CCDC166P0CW27 439 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 DCDC1P59894 354 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 ITGA9Q13797 1035 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 DEFB119Q8N690 84 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 BTN2A2Q8WVV5 523 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 CLPBQ9H078 707 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 CCDC68Q9H2F9 335 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 CAAP1Q9H8G2 361 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 ZDHHC3Q9NYG2 299 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 PLLPQ9Y342 182 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 PCYT1BQ9Y5K3 369 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-217ENST00000475693 AP1G1O43747 822 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 ZNF7P17097 686 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-217ENST00000475693 SUOXP51687 545 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 DGKEP52429 567 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 PTPN5P54829 565 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 DNAJC3Q13217 504 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 LRRC32Q14392 662 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 PTRHD1Q6GMV3 140 aaKnown RBP17.87■□□□□ 0.45
ATG4B-217ENST00000475693 FAM45BPQ6NSW5 357 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 CERS6Q6ZMG9 384 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 UBALD2Q8IYN6 164 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 RBFAQ8N0V3 343 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 CCDC63Q8NA47 563 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 TSTD1Q8NFU3 115 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 FAM45AQ8TCE6 357 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 HEXDCQ8WVB3 486 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 GLYATL1Q969I3 302 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 FAM131CQ96AQ9 280 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 ZSCAN5AQ9BUG6 496 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 POLMQ9NP87 494 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-217ENST00000475693 IKZF3Q9UKT9 509 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 ACOT9Q9Y305 439 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 PRKAB1Q9Y478 270 aa17.87■□□□□ 0.45
ATG4B-217ENST00000475693 CACNA1IQ9P0X4 2223 aa17.86■□□□□ 0.45
ATG4B-217ENST00000475693 CHURC1-FNTBB4DL54 471 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms