RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CLPXO76031 633 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 HOXB6P17509 224 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CKMT2P17540 419 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 DGKAP23743 735 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 PDHA2P29803 388 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 RPL14P50914 215 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 NKX2-5P52952 324 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 NAGLUP54802 743 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 MED22Q15528 200 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 KCNT2Q6UVM3 1135 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 ZNF567Q8N184 647 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 FATE1Q969F0 183 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 ACO2Q99798 780 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CENPOQ9BU64 300 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 NECTIN3Q9NQS3 549 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 TRMT13Q9NUP7 481 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 EVA1BQ9NVM1 165 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 COQ4Q9Y3A0 265 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 SAMHD1Q9Y3Z3 626 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 GTPBP1O00178 669 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CYP3A4P08684 503 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CTSEP14091 401 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 OPRL1P41146 370 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 RNF19BQ6ZMZ0 732 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 ZNF557Q8N988 423 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 IPCEF1Q8WWN9 437 aaPredicted RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CELF1Q92879 486 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 OR52B2Q96RD2 323 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 CKLFQ9UBR5 152 aa11.44□□□□□ -0.58
U2AF1-209ENST00000475639 SCAF8Q9UPN6 1271 aaKnown RBP11.44□□□□□ -0.58
U2AF1-209ENST00000475639 IRGMA1A4Y4 181 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 MSI1O43347 362 aaKnown RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 OR10H2O60403 315 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 IGSF6O95976 241 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 THP07101 528 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 CYP2A6P11509 494 aaPredicted RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 PRKCHP24723 683 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 CYP2F1P24903 491 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 IFITM3Q01628 133 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 LRP8Q14114 963 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 DPYSL3Q14195 570 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 AMHR2Q16671 573 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 INAVAQ3KP66 663 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 PIK3R6Q5UE93 754 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 TEX47Q8TBZ9 253 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 SUN5Q8TC36 379 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 FAM84AQ96KN4 292 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 PPP3R2Q96LZ3 170 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 CEP295NLQ96MC4 621 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 AIFM2Q9BRQ8 373 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 TNKS2Q9H2K2 1166 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 FBXO44Q9H4M3 255 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 ELP3Q9H9T3 547 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 OAS3Q9Y6K5 1087 aaKnown RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 A0A087WZ62 844 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 URADA6NGE7 173 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 GPR25O00155 361 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 SOCS2O14508 198 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 PLIN3O60664 434 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 LTFP02788 710 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 PRH1P02810 166 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 TPH1P17752 444 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 MATN1P21941 496 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 BMPR1AP36894 532 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 NAB1Q13506 487 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 DNASE1L3Q13609 305 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 USF2Q15853 346 aaPredicted RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 HMBOX1Q6NT76 420 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 RTL4Q6ZR62 310 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 UTS2BQ765I0 119 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 TRAPPC5Q8IUR0 188 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 SPAG16Q8N0X2 631 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 RHOBTB2Q9BYZ6 727 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 INTS7Q9NVH2 962 aaKnown RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 CORO2BQ9UQ03 480 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 AMHP03971 560 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 AMD1P17707 334 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 PGAM1P18669 254 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 BCL2L1Q07817 233 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 TRIM40Q6P9F5 258 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 EPGNQ6UW88 154 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 GPALPP1Q8IXQ4 340 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 PGAM4Q8N0Y7 254 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 NKAPQ8N5F7 415 aaKnown RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 SLCO4A1Q96BD0 722 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 MCCC1Q96RQ3 725 aaPredicted RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 NOL11Q9H8H0 719 aaKnown RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 TLR8Q9NR97 1041 aaKnown RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 SMOXQ9NWM0 555 aa11.43□□□□□ -0.58
U2AF1-209ENST00000475639 THG1LQ9NWX6 298 aaKnown RBP11.43□□□□□ -0.58
U2AF1-209ENST00000475639 FAM86C2PA6NEL3 165 aa11.42□□□□□ -0.58
U2AF1-209ENST00000475639 DLGAP1O14490 977 aa11.42□□□□□ -0.58
U2AF1-209ENST00000475639 ULK1O75385 1050 aa11.42□□□□□ -0.58
U2AF1-209ENST00000475639 SNRPB2P08579 225 aaKnown RBP11.42□□□□□ -0.58
U2AF1-209ENST00000475639 TGM1P22735 817 aa11.42□□□□□ -0.58
U2AF1-209ENST00000475639 GLDCP23378 1020 aa11.42□□□□□ -0.58
U2AF1-209ENST00000475639 OR1E1P30953 314 aa11.42□□□□□ -0.58
U2AF1-209ENST00000475639 NUMBP49757 651 aa11.42□□□□□ -0.58
U2AF1-209ENST00000475639 ARFIP1P53367 373 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms