RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SERPINA9Q86WD7 417 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 HS6ST3Q8IZP7 471 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 PAF1Q8N7H5 531 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 ADCY4Q8NFM4 1077 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 DDI1Q8WTU0 396 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 NUDT8Q8WV74 236 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 DNMT3BQ9UBC3 853 aaKnown RBP13.94□□□□□ -0.18
UBXN11-214ENST00000475591 VPS9D1Q9Y2B5 631 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 SNX13Q9Y5W8 968 aa13.94□□□□□ -0.18
UBXN11-214ENST00000475591 TCRBV3S1A0A5B6 114 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 GFRA2O00451 464 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 BAIAP3O94812 1187 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 CLDN7O95471 211 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 PRAMEF1O95521 474 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 ESR1P03372 595 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 CYBBP04839 570 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 HMGCLP35914 325 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 GRIA3P42263 894 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 ZFP36L2P47974 494 aaKnown RBP13.93□□□□□ -0.18
UBXN11-214ENST00000475591 HTR6P50406 440 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 CLCN4P51793 760 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 CHN2P52757 468 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 ERVPABLB-1P60509 514 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 UFM1P61960 85 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 CACNG1Q06432 222 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 RAB33AQ14088 237 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 GRM2Q14416 872 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 PLA2G4EQ3MJ16 856 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 MTX3Q5HYI7 312 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 HMBOX1Q6NT76 420 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 SLC15A3Q8IY34 581 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 PCYOX1LQ8NBM8 494 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 ROPN1LQ96C74 230 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 RPL10LQ96L21 214 aaKnown RBP13.93□□□□□ -0.18
UBXN11-214ENST00000475591 C1QTNF3Q9BXJ4 246 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 PAK6Q9NQU5 681 aaPredicted RBP13.93□□□□□ -0.18
UBXN11-214ENST00000475591 CMTM6Q9NX76 183 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 NDUFAF1Q9Y375 327 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 C1orf232A0A0U1RR37 186 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 TIPRLO75663 272 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 URODP06132 367 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 PRR35P0CG20 571 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 EPHB3P54753 998 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 MAP7D1Q3KQU3 841 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 XKR7Q5GH72 579 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 PAGE3Q5JUK9 113 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 HABP4Q5JVS0 413 aaKnown RBP13.93□□□□□ -0.18
UBXN11-214ENST00000475591 BLOC1S3Q6QNY0 202 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 SLC39A5Q6ZMH5 540 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 ZNF783Q6ZMS7 281 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 GPRIN3Q6ZVF9 776 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 GAREM2Q75VX8 874 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 ZSWIM9Q86XI8 627 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 BBS7Q8IWZ6 715 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
UBXN11-214ENST00000475591 OR56A4Q8NGH8 313 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 EME1Q96AY2 570 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 C17orf80Q9BSJ5 609 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 CIPCQ9C0C6 399 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 SMG9Q9H0W8 520 aaKnown RBP13.93□□□□□ -0.18
UBXN11-214ENST00000475591 RNF208Q9H0X6 261 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 NOL11Q9H8H0 719 aaKnown RBP13.93□□□□□ -0.18
UBXN11-214ENST00000475591 COQ10BQ9H8M1 238 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 SLAMF8Q9P0V8 285 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 HSFX1Q9UBD0 423 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 APPL1Q9UKG1 709 aa13.93□□□□□ -0.18
UBXN11-214ENST00000475591 CNOT6Q9ULM6 557 aaKnown RBP13.93□□□□□ -0.18
UBXN11-214ENST00000475591 C7orf72A4D263 438 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 BBIP1A8MTZ0 92 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 PRMT5O14744 637 aaPredicted RBP13.92□□□□□ -0.18
UBXN11-214ENST00000475591 PFDN6O15212 129 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 TEX28O15482 410 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 DENRO43583 198 aaKnown RBP13.92□□□□□ -0.18
UBXN11-214ENST00000475591 PGM3O95394 542 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 MATN4O95460 622 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 GUCA1CO95843 209 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 UROSP10746 265 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 IDO1P14902 403 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 ZNF26P17031 533 aaPredicted RBP13.92□□□□□ -0.18
UBXN11-214ENST00000475591 GABRR2P28476 465 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 TRAP1Q12931 704 aaKnown RBP13.92□□□□□ -0.18
UBXN11-214ENST00000475591 AARS2Q5JTZ9 985 aaKnown RBP13.92□□□□□ -0.18
UBXN11-214ENST00000475591 DHFR2Q86XF0 187 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 MARVELD2Q8N4S9 558 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 DCAF4L2Q8NA75 395 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 CANT1Q8WVQ1 401 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 TSC22D3Q99576 134 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 MAGEE1Q9HCI5 957 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 MRPL40Q9NQ50 206 aaKnown RBP13.92□□□□□ -0.18
UBXN11-214ENST00000475591 HACD3Q9P035 362 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 DHRS7Q9Y394 339 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 TYW5A2RUC4 315 aaKnown RBP13.92□□□□□ -0.18
UBXN11-214ENST00000475591 BNIP3LO60238 219 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 KATNA1O75449 491 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 MLYCDO95822 493 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 CAPNS1P04632 268 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 CKMP06732 381 aa13.92□□□□□ -0.18
UBXN11-214ENST00000475591 PIM1P11309 404 aaPredicted RBP13.92□□□□□ -0.18
UBXN11-214ENST00000475591 SLC6A2P23975 617 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms