RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 VAV2P52735 878 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 HADHBP55084 474 aaKnown RBP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 RPS18P62269 152 aaKnown RBP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 CTBSQ01459 385 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 IL10RBQ08334 325 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 RFTN1Q14699 578 aaPredicted RBP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 UGT8Q16880 541 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 ANKRD20A8PQ5CZ79 823 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 TMCO4Q5TGY1 634 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 LRRC38Q5VT99 294 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 C11orf63Q6NUN7 778 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 DAAM2Q86T65 1068 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 BBS5Q8N3I7 341 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 ELMO2Q96JJ3 720 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 EXOC2Q96KP1 924 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 ZNF830Q96NB3 372 aaPredicted RBP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 NUDT9Q9BW91 350 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 MAK16Q9BXY0 300 aaKnown RBP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 PDFQ9HBH1 243 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 PADI1Q9ULC6 663 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 MFSD11O43934 449 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 CEACAM4O75871 244 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 PIGNO95427 931 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 CEACAM5P06731 702 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 KDELR1P24390 212 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 PTGER4P35408 488 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 MMP12P39900 470 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 KIF5AQ12840 1032 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 ZNF235Q14590 738 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 IFI16Q16666 785 aaKnown RBP13.9□□□□□ -0.18
ATG9A-220ENST00000475339 CFAP58Q5T655 872 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 ERAP2Q6P179 960 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 ARHGAP36Q6ZRI8 547 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 TMEM139Q8IV31 216 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 PAF1Q8N7H5 531 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 RAPGEF5Q92565 580 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 ZNF599Q96NL3 588 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 DESI2Q9BSY9 194 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 GRPEL1Q9HAV7 217 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 LNPEPQ9UIQ6 1025 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 SUFUQ9UMX1 484 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 REXO2Q9Y3B8 237 aaKnown RBP13.9□□□□□ -0.18
ATG9A-220ENST00000475339 PLEKHM1Q9Y4G2 1056 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 ALG6Q9Y672 507 aa13.9□□□□□ -0.18
ATG9A-220ENST00000475339 A6NL46 340 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 PDE2AO00408 941 aaPredicted RBP13.89□□□□□ -0.19
ATG9A-220ENST00000475339 MX2P20592 715 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 IL4RP24394 825 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 ACTR1BP42025 376 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 FASLGP48023 281 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 RENBPP51606 427 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 ACTR1AP61163 376 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 SH3BP2P78314 561 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 IL10RAQ13651 578 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 LBRQ14739 615 aaKnown RBP13.89□□□□□ -0.19
ATG9A-220ENST00000475339 PAFAH1B3Q15102 231 aaKnown RBP13.89□□□□□ -0.19
ATG9A-220ENST00000475339 CYTH1Q15438 398 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 NCBP2-AS2Q69YL0 99 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 PNCKQ6P2M8 343 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 HPS6Q86YV9 775 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 LRRC49Q8IUZ0 686 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 RASGRP3Q8IV61 690 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 SLC37A2Q8TED4 501 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 FAF2Q96CS3 445 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 GOLPH3Q9H4A6 298 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 LHX9Q9NQ69 397 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 LATS2Q9NRM7 1088 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 COPG2Q9UBF2 871 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 LHX3Q9UBR4 397 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 OSGIN2Q9Y236 505 aa13.89□□□□□ -0.19
ATG9A-220ENST00000475339 MDC1Q14676 2089 aaKnown RBP13.89□□□□□ -0.19
ATG9A-220ENST00000475339 RCCD1A6NED2 376 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 BTNL10A8MVZ5 291 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 ZNF487B1APH4 448 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 C21orf140B9A014 251 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 APOL1O14791 398 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 MYCLP1P12525 358 aaPredicted RBP13.88□□□□□ -0.19
ATG9A-220ENST00000475339 ZFXP17010 805 aaPredicted RBP13.88□□□□□ -0.19
ATG9A-220ENST00000475339 ADCY8P40145 1251 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 PTGIRP43119 386 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 MAPK9P45984 424 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 POLD2P49005 469 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 GRM3Q14832 879 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 ZNF517Q6ZMY9 492 aaPredicted RBP13.88□□□□□ -0.19
ATG9A-220ENST00000475339 VSIG1Q86XK7 387 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 RFX6Q8HWS3 928 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 CCDC50Q8IVM0 306 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 NANOS1Q8WY41 292 aaKnown RBP13.88□□□□□ -0.19
ATG9A-220ENST00000475339 SEC14L1Q92503 715 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 ANP32BQ92688 251 aaKnown RBP13.88□□□□□ -0.19
ATG9A-220ENST00000475339 RNF25Q96BH1 459 aaPredicted RBP13.88□□□□□ -0.19
ATG9A-220ENST00000475339 RNF157Q96PX1 679 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 OR6C1Q96RD1 312 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 AKIRIN1Q9H9L7 192 aaPredicted RBP13.88□□□□□ -0.19
ATG9A-220ENST00000475339 HAUS2Q9NVX0 235 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 NTNG1Q9Y2I2 539 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 ATP8A1Q9Y2Q0 1164 aa13.88□□□□□ -0.19
ATG9A-220ENST00000475339 COPG1Q9Y678 874 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms