RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 FSTL5Q8N475 847 aaPredicted RBP6.55□□□□□ -1.36
ATG4A-207ENST00000474825 GPATCH11Q8N954 259 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 DDHD1Q8NEL9 900 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 ARMC2Q8NEN0 867 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 RHEBL1Q8TAI7 183 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 KCTD4Q8WVF5 259 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 ANKRD49Q8WVL7 239 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 BTN2A2Q8WVV5 523 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 FAM3CQ92520 227 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 NXNL1Q96CM4 212 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 ATXN7L3BQ96GX2 97 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 ELMO2Q96JJ3 720 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 CCT8L2Q96SF2 557 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 NDNQ99608 321 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 MRPL57Q9BQC6 102 aaKnown RBP6.55□□□□□ -1.36
ATG4A-207ENST00000474825 FAM126AQ9BYI3 521 aaPredicted RBP6.55□□□□□ -1.36
ATG4A-207ENST00000474825 DERL2Q9GZP9 239 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 MKRN2Q9H000 416 aaKnown RBP6.55□□□□□ -1.36
ATG4A-207ENST00000474825 KDM4CQ9H3R0 1056 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 TFB2MQ9H5Q4 396 aaKnown RBP6.55□□□□□ -1.36
ATG4A-207ENST00000474825 FAM96AQ9H5X1 160 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 NMRAL1Q9HBL8 299 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 SYTL2Q9HCH5 934 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 GPAMQ9HCL2 828 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF358Q9NW07 568 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 TAS2R13Q9NYV9 303 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 COPG2Q9UBF2 871 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 WNT16Q9UBV4 365 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 MID2Q9UJV3 735 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 CNOT6Q9ULM6 557 aaKnown RBP6.55□□□□□ -1.36
ATG4A-207ENST00000474825 FZD4Q9ULV1 537 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 MMP17Q9ULZ9 603 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 RUVBL2Q9Y230 463 aaKnown RBP6.55□□□□□ -1.36
ATG4A-207ENST00000474825 CKAP5Q14008 2032 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 TTC28Q96AY4 2481 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 SCN8AQ9UQD0 1980 aa6.55□□□□□ -1.36
ATG4A-207ENST00000474825 TRIOO75962 3097 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 FADS2P1A8MWK0 482 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 A8MX80 341 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 MID1O15344 667 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GPR39O43194 453 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 PLRG1O43660 514 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 KLK8O60259 260 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 SYNCRIPO60506 623 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 EDF1O60869 148 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GPR37L1O60883 481 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 RECQL5O94762 991 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 TGDSO95455 350 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 PYGLP06737 847 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 RBP1P09455 135 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 LTA4HP09960 611 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ELFN1P0C7U0 828 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 VSIG8P0DPA2 414 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 FGF3P11487 239 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 C6P13671 934 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 HOXB2P14652 356 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 CPA3P15088 417 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 CD1DP15813 335 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 XPAP23025 273 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GRK2P25098 689 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ALDH3A1P30838 453 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 PSMD8P48556 350 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 KPNA2P52292 529 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 SLC12A2P55011 1212 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 STARD6P59095 220 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 DNAJB13P59910 316 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ATP6V0D1P61421 351 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 NFKB2Q00653 900 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 SEMG2Q02383 582 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ZP2Q05996 745 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF460Q14592 562 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 STARD3Q14849 445 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 MLF2Q15773 248 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF658BQ4V348 819 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 TMEM259Q4ZIN3 620 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 LRRC73Q5JTD7 316 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 EOGTQ5NDL2 527 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GPRC6AQ5T6X5 926 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 CES4AQ5XG92 561 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 LRRC8EQ6NSJ5 796 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 UGT3A1Q6NUS8 523 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 C16orf46Q6P387 395 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 PAQR3Q6TCH7 311 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ADAMTSL4Q6UY14 1074 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 ZYG11AQ6WRX3 759 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 RAPH1Q70E73 1250 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 TAS2R42Q7RTR8 314 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 TBC1D1Q86TI0 1168 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 LRRC34Q8IZ02 419 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 NKAPQ8N5F7 415 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 OTUD6BQ8N6M0 293 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 TXNDC5Q8NBS9 432 aaKnown RBP6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GIMAP7Q8NHV1 300 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 CD200R1Q8TD46 325 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 MGARPQ8TDB4 240 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 DYDC1Q8WWB3 177 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 SCAMP4Q969E2 229 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GLYATL1Q969I3 302 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 KIAA1191Q96A73 305 aa6.54□□□□□ -1.36
ATG4A-207ENST00000474825 GRAMD1AQ96CP6 724 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms