RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SCARF2Q96GP6 870 aaPredicted RBP14.96□□□□□ -0.01
VARS-223ENST00000474643 COX14Q96I36 57 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 LYSMD1Q96S90 227 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ZSCAN5AQ9BUG6 496 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 GBA3Q9H227 469 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 FOXJ2Q9P0K8 574 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 ACSL6Q9UKU0 697 aa14.96□□□□□ -0.01
VARS-223ENST00000474643 R3HDM2Q9Y2K5 976 aaKnown RBP14.96□□□□□ -0.01
VARS-223ENST00000474643 UNC13CQ8NB66 2214 aa14.96□□□□□ -0.02
VARS-223ENST00000474643 MGAQ8IWI9 3026 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 IGHV1OR21-1A0A087WYE8 117 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 PPM1DO15297 605 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 GRID2O43424 1007 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 C1QL1O75973 258 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 PIRTP0C851 137 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 CD1CP29017 333 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 CXCR5P32302 372 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 LIMK2P53671 638 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 MPP3Q13368 585 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 SNX1Q13596 522 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 HENMT1Q5T8I9 393 aaKnown RBP14.95□□□□□ -0.02
VARS-223ENST00000474643 VASH2Q86V25 355 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 C17orf82Q86X59 251 aaPredicted RBP14.95□□□□□ -0.02
VARS-223ENST00000474643 SLC25A41Q8N5S1 370 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 IL22RA1Q8N6P7 574 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 FAM71DQ8N9W8 422 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 GDAP1Q8TB36 358 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 JPH3Q8WXH2 748 aaPredicted RBP14.95□□□□□ -0.02
VARS-223ENST00000474643 ATG4AQ8WYN0 398 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 NCSTNQ92542 709 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 ART4Q93070 314 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 SPATA13Q96N96 652 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 PPP1R2P1Q96PQ5 205 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 TAAR9Q96RI9 348 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 SRPK1Q96SB4 655 aaKnown RBP14.95□□□□□ -0.02
VARS-223ENST00000474643 TMEM121Q9BTD3 319 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 TLR10Q9BXR5 811 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.95□□□□□ -0.02
VARS-223ENST00000474643 FRMD8P1Q9BZ68 369 aaPredicted RBP14.95□□□□□ -0.02
VARS-223ENST00000474643 OR2AG1Q9H205 316 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 ZNF148Q9UQR1 794 aa14.95□□□□□ -0.02
VARS-223ENST00000474643 AAR2Q9Y312 384 aaKnown RBP14.95□□□□□ -0.02
VARS-223ENST00000474643 OAS3Q9Y6K5 1087 aaKnown RBP14.95□□□□□ -0.02
VARS-223ENST00000474643 GCN1Q92616 2671 aaKnown RBP14.94□□□□□ -0.02
VARS-223ENST00000474643 USP27XA6NNY8 438 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 EFCAB7A8K855 629 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 A8MU76 341 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 PDZK1P1A8MUH7 402 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 KIF2AO00139 706 aaPredicted RBP14.94□□□□□ -0.02
VARS-223ENST00000474643 FGGP02679 453 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 CCL4P13236 92 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 PSMB4P28070 264 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 DEKP35659 375 aaKnown RBP14.94□□□□□ -0.02
VARS-223ENST00000474643 FASLGP48023 281 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 GTF2H3Q13889 308 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 LONRF2Q1L5Z9 754 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 PLA2G4EQ3MJ16 856 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 DCAF12Q5T6F0 453 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 TMEM71Q6P5X7 295 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 CRTC3Q6UUV7 619 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 SFRP1Q8N474 314 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 SNRNP27Q8WVK2 155 aaKnown RBP14.94□□□□□ -0.02
VARS-223ENST00000474643 C1orf54Q8WWF1 131 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 MED8Q96G25 268 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 TTC25Q96NG3 672 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 ASPSCR1Q9BZE9 553 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 ARFGAP3Q9NP61 516 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 SLC39A1Q9NY26 324 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 KLHL3Q9UH77 587 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 ZNF711Q9Y462 761 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 HEMK1Q9Y5R4 338 aaPredicted RBP14.94□□□□□ -0.02
VARS-223ENST00000474643 ST14Q9Y5Y6 855 aa14.94□□□□□ -0.02
VARS-223ENST00000474643 ARHGEF17Q96PE2 2063 aaPredicted RBP14.93□□□□□ -0.02
VARS-223ENST00000474643 KIR2DS5A0A0G2JLQ3 304 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 A0A0G2JNG1 304 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 OR5K4A6NMS3 321 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 FADS2P1A8MWK0 482 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 C9orf172C9J069 976 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 KIR2DS3K7RE56 304 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 EFSO43281 561 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 F3P13726 295 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 VCLP18206 1134 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 RAB15P59190 212 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 KIR2DS5Q14953 304 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 PDPK2PQ6A1A2 396 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 KDELC1Q6UW63 502 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 SLC35F6Q8N357 371 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 TADA1Q96BN2 335 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 OXNAD1Q96HP4 312 aaPredicted RBP14.93□□□□□ -0.02
VARS-223ENST00000474643 TRIB3Q96RU7 358 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 FICDQ9BVA6 458 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 FAM117AQ9C073 453 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 MAGEE1Q9HCI5 957 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 SARS2Q9NP81 518 aaKnown RBP14.93□□□□□ -0.02
VARS-223ENST00000474643 KLC4Q9NSK0 619 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 TBC1D29Q9UFV1 150 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 ATMQ13315 3056 aa14.93□□□□□ -0.02
VARS-223ENST00000474643 C5orf60A6NFR6 353 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 GPR89AB7ZAQ6 455 aa14.92□□□□□ -0.02
VARS-223ENST00000474643 CES2O00748 559 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms