RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TRPC4APQ8TEL6 797 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 BADQ92934 168 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 IRF7Q92985 503 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 BHMTQ93088 406 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 FAM136AQ96C01 138 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 NAF1Q96HR8 494 aaKnown RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 ZNF641Q96N77 438 aaPredicted RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 PLEKHG4BQ96PX9 1271 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 ZNF382Q96SR6 550 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 TTC1Q99614 292 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 HTATIP2Q9BUP3 242 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 SLC2A11Q9BYW1 496 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 SMG9Q9H0W8 520 aaKnown RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 SUV39H2Q9H5I1 410 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 ASB8Q9H765 288 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 SPHK2Q9NRA0 654 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 TDP1Q9NUW8 608 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 PCDH10Q9P2E7 1040 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 TBC1D14Q9P2M4 693 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 NFKBIL1Q9UBC1 381 aaPredicted RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 SLC25A13Q9UJS0 675 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 ZNF225Q9UK10 706 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 FBXO10Q9UK96 956 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 G3BP2Q9UN86 482 aaKnown RBP9.71□□□□□ -0.86
USP39-214ENST00000474572 FIS1Q9Y3D6 152 aa9.71□□□□□ -0.86
USP39-214ENST00000474572 DOCK6Q96HP0 2047 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 A0A1B0GTL3 188 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 LINC01553A4QN01 128 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 IQCF5A8MTL0 148 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 BBIP1A8MTZ0 92 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 PSMD12O00232 456 aaPredicted RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 EIF3FO00303 357 aaPredicted RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 FBP2O00757 339 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 CASQ2O14958 399 aaPredicted RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 GPC4O75487 556 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 RFPL2O75678 378 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 POP4O95707 220 aaKnown RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 ESRRBO95718 433 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 C1SP09871 688 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 UROSP10746 265 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 CHRM3P20309 590 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 LHCGRP22888 699 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 WEE1P30291 646 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 THOP1P52888 689 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 CEACAM7Q14002 265 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 CAMK1Q14012 370 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 GBX1Q14549 363 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 TAF11Q15544 211 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 CHRNA6Q15825 494 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 GSTA3Q16772 222 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 SLC5A9Q2M3M2 681 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 ZDHHC20Q5W0Z9 365 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 REP15Q6BDI9 236 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 METTL2BQ6P1Q9 378 aaKnown RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 FAM151BQ6UXP7 276 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 RNF111Q6ZNA4 994 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 USP45Q70EL2 814 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 SYVN1Q86TM6 617 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 TSPAN33Q86UF1 283 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 ADIPOR2Q86V24 386 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 GPSM1Q86YR5 675 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 FUNDC1Q8IVP5 155 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 NXPE1Q8N323 547 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 GPR26Q8NDV2 337 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 OR56A4Q8NGH8 313 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 TSPEARQ8WU66 669 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 UBTD2Q8WUN7 234 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 DNAJC9Q8WXX5 260 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 RSRC1Q96IZ7 334 aaKnown RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 RPL10LQ96L21 214 aaKnown RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 CCT7Q99832 543 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 SLC25A23Q9BV35 468 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 BOCQ9BWV1 1114 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 CLPBQ9H078 707 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 AKTIPQ9H8T0 292 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 WDR41Q9HAD4 459 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 RDH14Q9HBH5 336 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 TMEM45AQ9NWC5 275 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 ZDHHC7Q9NXF8 308 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 CACNA2D2Q9NY47 1150 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 ZDHHC3Q9NYG2 299 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 HECAQ9UBI9 543 aaPredicted RBP9.7□□□□□ -0.86
USP39-214ENST00000474572 POLG2Q9UHN1 485 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 PPM1HQ9ULR3 514 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 OARD1Q9Y530 152 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 PCDHGA7Q9Y5G6 932 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 PRSS21Q9Y6M0 314 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 COL4A3Q01955 1670 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 KIAA1549LQ6ZVL6 1849 aa9.7□□□□□ -0.86
USP39-214ENST00000474572 H3BNX3 289 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 TRIM38O00635 465 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 TRIM24O15164 1050 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 TLL1O43897 1013 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 RB1P06400 928 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 SNRPB2P08579 225 aaKnown RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 CBSLP0DN79 551 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 CHRM1P11229 460 aaPredicted RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 ENO3P13929 434 aaPredicted RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 ZNF30P17039 623 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms