RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 HGFP14210 728 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 MSH3P20585 1137 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 MPSTP25325 297 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 RPL10P27635 214 aaKnown RBP15.77■□□□□ 0.12
ITGB1-210ENST00000474568 MAPK9P45984 424 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 KCNJ1P48048 391 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 DRG2P55039 364 aaKnown RBP15.77■□□□□ 0.12
ITGB1-210ENST00000474568 XIAPP98170 497 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 HHEXQ03014 270 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 LDLRAP1Q5SW96 308 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 PHF19Q5T6S3 580 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 IYDQ6PHW0 289 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 TMEM220Q6QAJ8 160 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 PPP1R21Q6ZMI0 780 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 ZNF438Q7Z4V0 828 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 REXO1L1PQ8IX06 675 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 DNAAF3Q8N9W5 541 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 DDHD1Q8NEL9 900 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 CCDC97Q96F63 343 aaPredicted RBP15.77■□□□□ 0.12
ITGB1-210ENST00000474568 NAF1Q96HR8 494 aaKnown RBP15.77■□□□□ 0.12
ITGB1-210ENST00000474568 SLC38A3Q99624 504 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 ZCCHC2Q9C0B9 1178 aaKnown RBP15.77■□□□□ 0.12
ITGB1-210ENST00000474568 SEMA6CQ9H3T2 930 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 KCNK4Q9NYG8 393 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 FAM8A1Q9UBU6 413 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 CRLS1Q9UJA2 301 aa15.77■□□□□ 0.12
ITGB1-210ENST00000474568 APC2O95996 2303 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 CCDC187A0A096LP49 1063 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 A6NCN8 305 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 GPR89AB7ZAQ6 455 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 LDB2O43679 373 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 GPR89BP0CG08 455 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 PRSS56P0CW18 603 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 F3P13726 295 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 CD1CP29017 333 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 MC4RP32245 332 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 RPL22P35268 128 aaKnown RBP15.76■□□□□ 0.11
ITGB1-210ENST00000474568 FDFT1P37268 417 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 GRIA1P42261 906 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 LSSP48449 732 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 TERF1P54274 439 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 CCDC173Q0VFZ6 552 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 CCNG2Q16589 344 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 TBC1D25Q3MII6 688 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 CCDC38Q502W7 563 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 ZRANB3Q5FWF4 1079 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 GSTA5Q7RTV2 222 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 SLC9B2Q86UD5 537 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 PIM3Q86V86 326 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 SLC35F6Q8N357 371 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 BEND7Q8N7W2 519 aaPredicted RBP15.76■□□□□ 0.11
ITGB1-210ENST00000474568 WDR36Q8NI36 951 aaKnown RBP15.76■□□□□ 0.11
ITGB1-210ENST00000474568 DTX3LQ8TDB6 740 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 ANP32BQ92688 251 aaKnown RBP15.76■□□□□ 0.11
ITGB1-210ENST00000474568 MS4A14Q96JA4 679 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 TMEM74Q96NL1 305 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 TIMM29Q9BSF4 260 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 STRADBQ9C0K7 418 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 SMARCAL1Q9NZC9 954 aa15.76■□□□□ 0.11
ITGB1-210ENST00000474568 FEZ2Q9UHY8 353 aaPredicted RBP15.76■□□□□ 0.11
ITGB1-210ENST00000474568 ARHGEF17Q96PE2 2063 aaPredicted RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 IGHV1OR21-1A0A087WYE8 117 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 PRAMEF33A0A0G2JMD5 474 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 POP7O75817 140 aaKnown RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 TNFSF15O95150 251 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 CPNE6O95741 557 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 HOXB3P14651 431 aaPredicted RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 SLC2A4P14672 509 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 ITGALP20701 1170 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 RBMS1P29558 406 aaKnown RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 CDKN1CP49918 316 aaPredicted RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 PDE1BQ01064 536 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 NR1D2Q14995 579 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 FNBP1LQ5T0N5 605 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 RAB11FIP2Q7L804 512 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 C11orf96Q7Z7L8 435 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 SLITRK4Q8IW52 837 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 TRIM48Q8IWZ4 208 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 FBXO39Q8N4B4 442 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 RCBTB1Q8NDN9 531 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 MAIP1Q8WWC4 291 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 FGF11Q92914 225 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 SGF29Q96ES7 293 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 PRR11Q96HE9 360 aaPredicted RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 AHCYL2Q96HN2 611 aaKnown RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 TBC1D10AQ9BXI6 508 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 STN1Q9H668 368 aaKnown RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 SMOXQ9NWM0 555 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 TMEM9Q9P0T7 183 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 PAK5Q9P286 719 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 CPNE7Q9UBL6 633 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 PISDQ9UG56 409 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 RALYQ9UKM9 306 aaKnown RBP15.75■□□□□ 0.11
ITGB1-210ENST00000474568 LOXL2Q9Y4K0 774 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 SLC30A1Q9Y6M5 507 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 SCN8AQ9UQD0 1980 aa15.75■□□□□ 0.11
ITGB1-210ENST00000474568 COL27A1Q8IZC6 1860 aaPredicted RBP15.74■□□□□ 0.11
ITGB1-210ENST00000474568 KIR2DS5A0A0G2JLQ3 304 aa15.74■□□□□ 0.11
ITGB1-210ENST00000474568 A0A0G2JNG1 304 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms