RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CYS1Q717R9 158 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 SLC25A41Q8N5S1 370 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 STYXQ8WUJ0 223 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 CFHR4Q92496 578 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PHYHIPQ92561 330 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 CORO2AQ92828 525 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 NKD1Q969G9 470 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 MRGPRFQ96AM1 343 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PACRGQ96M98 296 aaPredicted RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 MBOAT7Q96N66 472 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TMEM79Q9BSE2 394 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 COPS4Q9BT78 406 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 LRRC1Q9BTT6 524 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ZYG11BQ9C0D3 744 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ACTR6Q9GZN1 396 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TOLLIPQ9H0E2 274 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 GLOD4Q9HC38 313 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 SMURF1Q9HCE7 757 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TAB2Q9NYJ8 693 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 SMARCAL1Q9NZC9 954 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PDP1Q9P0J1 537 aaPredicted RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 ERVK-18Q9QC07 812 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TRMT6Q9UJA5 497 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 MAP3K15Q6ZN16 1313 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TEX13CA0A0J9YWL9 993 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 C5orf60A6NFR6 353 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 OR6C76A6NM76 312 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TCP11X1B4DZS4 312 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PRR23D1E9PI22 279 aaPredicted RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 SLC30A4O14863 429 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 SCN2BO60939 215 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 FBXO24O75426 580 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 GH2P01242 217 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 LCKP06239 509 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 HCKP08631 526 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PRR23D2P0DMB1 279 aaPredicted RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 CD1EP15812 388 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 GNAZP19086 355 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TNNI1P19237 187 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 FUT1P19526 365 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 GJA4P35212 333 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 CDKN1AP38936 164 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 BAG6P46379 1132 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 KCNJ1P48048 391 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 DCDC1P59894 354 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 FLI1Q01543 452 aaPredicted RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 ZNF45Q02386 682 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 HSF2Q03933 536 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ANGPT1Q15389 498 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 NAB2Q15742 525 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 DUSP7Q16829 419 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 BTBD16Q32M84 506 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 SV2CQ496J9 727 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 LIN52Q52LA3 116 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 EFHC2Q5JST6 749 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 NT5DC1Q5TFE4 455 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 LIPJQ5W064 366 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 SLC9A4Q6AI14 798 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ZNF470Q6ECI4 717 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 MSANTD2Q6P1R3 559 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ABHD17CQ6PCB6 329 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 BHLHB9Q6PI77 547 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 VHLLQ6RSH7 139 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ARSKQ6UWY0 536 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 SLCO6A1Q86UG4 719 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 KATNAL2Q8IYT4 538 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 RCOR2Q8IZ40 523 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 EID3Q8N140 333 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ARMC10Q8N2F6 343 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 FAM109AQ8N4B1 249 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ENDOVQ8N8Q3 282 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 SYT14Q8NB59 555 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 OR2L3Q8NG85 312 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PIWIL2Q8TC59 973 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 LRTOMTQ8WZ04 291 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 TRIB2Q92519 343 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PPP1R14AQ96A00 147 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 RNF125Q96EQ8 232 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PTCD3Q96EY7 689 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 FCRL2Q96LA5 508 aaPredicted RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 APOLD1Q96LR9 279 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 NECTIN4Q96NY8 510 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 CITED1Q99966 193 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 METTL9Q9H1A3 318 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 DPEP2Q9H4A9 486 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 CATSPERBQ9H7T0 1116 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 LRRC40Q9H9A6 602 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ELP3Q9H9T3 547 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 MOV10Q9HCE1 1003 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 TRNAU1APQ9NX07 287 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 SARDHQ9UL12 918 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 HIF3AQ9Y2N7 669 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 NOC2LQ9Y3T9 749 aaKnown RBP3.46□□□□□ -1.86
UBR3-208ENST00000474426 CPQQ9Y646 472 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 PBRM1Q86U86 1689 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 RTL9Q8NET4 1388 aa3.46□□□□□ -1.86
UBR3-208ENST00000474426 ZNF839A8K0R7 811 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 AGPSO00116 658 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 GMDSO60547 372 aa3.45□□□□□ -1.86
UBR3-208ENST00000474426 TSPAN2O60636 221 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms